The 2023 MDPI Annual Report has
been released!
 
13 pages, 7853 KiB  
Article
Substitution of Inorganic Fertilizer with Organic Fertilizer Influences Soil Carbon and Nitrogen Content and Enzyme Activity under Rubber Plantation
by Qiu Yang, Jiale Li, Wenxian Xu, Jingjing Wang, Yamin Jiang, Waqar Ali and Wenjie Liu
Forests 2024, 15(5), 756; https://doi.org/10.3390/f15050756 (registering DOI) - 25 Apr 2024
Abstract
Conventional fertilization practices can lead to many ecological problems, such as nutrient imbalance, soil acidity, and reduced soil fertility, in natural rubber plantations. To address these challenges, a field investigation was strategically carried out to substitute inorganic fertilizer with organic fertilizer, consisting of [...] Read more.
Conventional fertilization practices can lead to many ecological problems, such as nutrient imbalance, soil acidity, and reduced soil fertility, in natural rubber plantations. To address these challenges, a field investigation was strategically carried out to substitute inorganic fertilizer with organic fertilizer, consisting of six treatments: no fertilization (CK), inorganic fertilizer (NPK), 25% replacement of inorganic through organic (25% manure (M)), 50% replacement of inorganic through organic (50% manure (M)), 75% replacement of inorganic through organic (75% manure (M)), and 100% organic fertilizer (100% manure). The soil physicochemical properties (soil organic carbon (SOC), total nitrogen (TN), mineral nitrogen (N), ammonium nitrogen (NH4+-N), and nitrate nitrogen (NO3-N)), C:N, pH, and the carbon- and nitrogen-converting enzymes β-1,4-glucosidase (BG), N-acetylglucosaminidase (NAG) and L-leucine aminopeptidase (LAP) were all determined. The partial substitution of inorganic fertilizer with organic fertilizer (i.e., 75% M at surface soil layer) showed higher SOC (14.52 g·kg−1), TN (1.06 g·kg−1), N (20.07 mg·kg−1), C:N (14.63), NH4+-N (10.63 mg·kg−1), and NO3-N (11.06 mg·kg−1) than NPK and CK. This increase in physicochemical properties after partial replacement of inorganic with organic fertilizer resulted from higher carbon and nitrogen enzyme activities (BG (143.17·nmol·g−1·h−1), NAG (153.96 nmol·g−1·h−1), and LAP (153.48 nmol·g−1·h−1)) compared to NPK and CK. Further, the Pearson correlation and redundancy analysis (RDA) analyses confirmed a significant positive correlation between SOC, N, and soil enzymes. This study presents a new strategy for assessing the impact of partially replacing inorganic fertilizer with organic fertilizer in rubber plantations in tropical regions, mainly by modifying the soil nutrient composition. Full article
15 pages, 360 KiB  
Article
Prevalence and Determinants of Undernutrition in Schoolchildren in the Kilombero District, South-Eastern Tanzania
by Elihaika G. Minja, Emmanuel C. Mrimi, Winfrida P. Mponzi, Getrud J. Mollel, Christin Lang, Johanna Beckmann, Markus Gerber, Uwe Pühse, Kurt Z. Long, Honorati Masanja, Fredros O. Okumu, Marceline F. Finda and Jürg Utzinger
Trop. Med. Infect. Dis. 2024, 9(5), 96; https://doi.org/10.3390/tropicalmed9050096 (registering DOI) - 25 Apr 2024
Abstract
Childhood undernutrition is a major issue in low- and middle-income countries, affecting the health, well-being, and educational outcomes of schoolchildren. This study aimed to assess the prevalence and associated factors of stunting, wasting, and underweight among schoolchildren in peri-urban areas in the south-eastern [...] Read more.
Childhood undernutrition is a major issue in low- and middle-income countries, affecting the health, well-being, and educational outcomes of schoolchildren. This study aimed to assess the prevalence and associated factors of stunting, wasting, and underweight among schoolchildren in peri-urban areas in the south-eastern part of Tanzania. A cross-sectional study was conducted involving 930 children aged 6–12 years from four primary schools from July to August 2019. The WHO Anthro Survey Analyzer was employed to estimate the prevalence of stunting, wasting, and underweight, while logistic regression analyses examined sociodemographic background, malaria infection, anaemia, anthropometric measures, and dietary diversity score as potential factors. The prevalence of stunting, wasting, underweight, overweight, and obesity was 11.8%, 4.3%, 3.9%, 11.1%, and 2.0%, respectively. Overall, 1.5% of the children had malaria, as determined by rapid diagnostic tests, and 0.4% had severe anaemia. Univariate analysis indicated higher odds of undernutrition among children aged 9–12 compared to their younger peers. Stunting was more common among children with low and medium dietary diversity. Anaemia was found in 11.2% of schoolchildren, and severe anaemia was associated with wasting. Multivariate analysis revealed that age and low dietary diversity were significantly associated with undernutrition. These findings emphasise the need for school-based health and nutrition programmes targeting children beyond the age of 5 to improve their nutritional status and mitigate potential adverse effects on health, cognition, and academic achievement. Regular assessment of the nutritional status of schoolchildren is warranted. Full article
21 pages, 500 KiB  
Review
Advances in Organosulfur-Based Polymers for Drug Delivery Systems
by Fawad Islam and Qingle Zeng
Polymers 2024, 16(9), 1207; https://doi.org/10.3390/polym16091207 (registering DOI) - 25 Apr 2024
Abstract
Organosulfur-based polymers have unique properties that make them useful for targeted and managed drug delivery, which can improve therapy while reducing side effects. This work aims to provide a brief review of the synthesis strategies, characterization techniques, and packages of organosulfur-based polymers in [...] Read more.
Organosulfur-based polymers have unique properties that make them useful for targeted and managed drug delivery, which can improve therapy while reducing side effects. This work aims to provide a brief review of the synthesis strategies, characterization techniques, and packages of organosulfur-based polymers in drug delivery. More importantly, this work discusses the characterization, biocompatibility, controlled release, nanotechnology, and targeted therapeutic aspects of these important structural units. This review provides not only a good comprehension of organosulfur-based polymers but also an insightful discussion of potential future prospectives in research. The discovery of novel organosulfur polymers and innovations is highly expected to be stimulated in order to synthesize polymer prototypes with increased functional accuracy, efficiency, and low cost for many industrial applications. Full article
(This article belongs to the Special Issue Recent Progress in Sulfur-Containing Polymers)
20 pages, 741 KiB  
Article
Optimized Battery Capacity Allocation Method for Wind Farms with Dual Operating Conditions
by Chenrui Duanmu, Linjun Shi, Deping Jian, Renshan Ding, Yang Li and Feng Wu
Sustainability 2024, 16(9), 3615; https://doi.org/10.3390/su16093615 (registering DOI) - 25 Apr 2024
Abstract
In order to solve the problems of wind power output volatility and wind power participation in frequency regulation, a method for optimizing the capacity allocation of wind farm storage batteries based on the dual grouping strategy and considering the simultaneous execution of the [...] Read more.
In order to solve the problems of wind power output volatility and wind power participation in frequency regulation, a method for optimizing the capacity allocation of wind farm storage batteries based on the dual grouping strategy and considering the simultaneous execution of the dual conditions of energy storage in fluctuation smoothing and primary frequency regulation is proposed. Firstly, a two-layer model is established to optimize the capacity allocation under dual operating conditions, i.e., the planning layer takes into account the lifetime, cost, and benefit, and the operation layer considers the wind turbine reserve backup and storage control to participate in the primary frequency regulation in a cooperative manner. Then, the dual battery pack operation strategy is embedded with the variational modal decomposition method to determine the charging and discharging operation strategy of energy storage after considering the grid-optimized reference power. An improved particle swarm algorithm with inverse learning pre-optimization combined with variational crossover post-optimization is embedded in the GUROBI computation to obtain the optimal battery storage capacity allocation scheme. Finally, the superiority of the model proposed in this paper in terms of improving energy storage utilization, service life, and economic efficiency as well as reducing wind power load shedding is verified by comparing it with a single execution working condition scenario and traditional battery control strategy. Full article
(This article belongs to the Special Issue Sustainable Operation and Control of Renewable Energy Resources)
20 pages, 679 KiB  
Article
Pedagogical Competence Analysis Based on the TPACK Model: Focus on VR-Based Survival Swimming Instructors
by Yoo Churl Shin and Chulwoo Kim
Educ. Sci. 2024, 14(5), 460; https://doi.org/10.3390/educsci14050460 (registering DOI) - 25 Apr 2024
Abstract
This study explores the pedagogical competence of VR-based survival swimming instructors in South Korea, focusing on their application of Technological Pedagogical Content Knowledge (TPACK). Employing qualitative methodology, we conducted in-depth interviews with 11 instructors to understand their instructional strategies within a VR context. [...] Read more.
This study explores the pedagogical competence of VR-based survival swimming instructors in South Korea, focusing on their application of Technological Pedagogical Content Knowledge (TPACK). Employing qualitative methodology, we conducted in-depth interviews with 11 instructors to understand their instructional strategies within a VR context. The study aimed to identify how instructors integrate TPACK components into their teaching, specifically exploring technological content knowledge (content utilization, equipment preparation, addressing dizziness), pedagogical content knowledge (creating a conducive learning environment, enhancing student engagement), and technological pedagogical knowledge (setting appropriate learning objectives and guidelines, educational assessment), understanding learners, and pedagogical beliefs and philosophy. Our findings reveal that VR-based instructors proficiently blend these knowledge domains to enhance the effectiveness of survival swimming education. The results demonstrate that strategic pedagogical approaches are crucial in leveraging VR technology for educational outcomes, highlighting the importance of instructor competence in successfully implementing VR in teaching. This research contributes to the literature by detailing specific competencies critical for VR-based education and suggesting that a thorough understanding and application of the TPACK framework are essential for optimizing VR’s educational potential. Full article
(This article belongs to the Special Issue Teaching and Learning with Virtual/Augmented Reality)
12 pages, 1582 KiB  
Article
A Study of {10-12} Twinning Activity Associated with Stress State in Mg-3Al-1Zn Alloy during Compression
by Boqin Lu, Wei Wang, Jinyi Yao, Liping Deng, Lei Xiao and Bingshu Wang
Metals 2024, 14(5), 502; https://doi.org/10.3390/met14050502 (registering DOI) - 25 Apr 2024
Abstract
An eight-sided prism sample, obtained from a hot-rolled AZ31 magnesium alloy sheet, was compressed at room temperature along the transverse direction to investigate the influence of local strain on twinning behavior using electron backscatter diffraction (EBSD) measurements, hardness distribution, and metallographic observations. The [...] Read more.
An eight-sided prism sample, obtained from a hot-rolled AZ31 magnesium alloy sheet, was compressed at room temperature along the transverse direction to investigate the influence of local strain on twinning behavior using electron backscatter diffraction (EBSD) measurements, hardness distribution, and metallographic observations. The octagonal surface of the sample was divided into distinct regions based on hardness distribution and metallographic observations. Combined analysis of the Schmid factor (SF) and the strain compatibility factor (m’) was employed to study twin variant selection. Basal on SF ratio distribution, the Schmid factor criterion, can predict over 75% of observed twin variants in regions A and D (normal stress samples). In contrast, 64% of twin variant selection behavior in region C (shear stress sample) can be effectively explained using a pure shear model. Twin variants with high strain compatibility factors may prefer activation to reduce stress concentration. The strain compatibility factor is more appropriate than the Schmid factor for analyzing the effect of local strain on the selection behavior of twin variants. Full article
(This article belongs to the Special Issue Deformation and Phase Transformation Mechanism of Metallic Materials)
17 pages, 2087 KiB  
Article
Analysing the Cyanobacterial PipX Interaction Network Using NanoBiT Complementation in Synechococcus elongatus PCC7942
by Carmen Jerez, Antonio Llop, Paloma Salinas, Sirine Bibak, Karl Forchhammer and Asunción Contreras
Int. J. Mol. Sci. 2024, 25(9), 4702; https://doi.org/10.3390/ijms25094702 (registering DOI) - 25 Apr 2024
Abstract
The conserved cyanobacterial protein PipX is part of a complex interaction network with regulators involved in essential processes that include metabolic homeostasis and ribosome assembly. Because PipX interactions depend on the relative levels of their different partners and of the effector molecules binding [...] Read more.
The conserved cyanobacterial protein PipX is part of a complex interaction network with regulators involved in essential processes that include metabolic homeostasis and ribosome assembly. Because PipX interactions depend on the relative levels of their different partners and of the effector molecules binding to them, in vivo studies are required to understand the physiological significance and contribution of environmental factors to the regulation of PipX complexes. Here, we have used the NanoBiT complementation system to analyse the regulation of complex formation in Synechococcus elongatus PCC 7942 between PipX and each of its two best-characterized partners, PII and NtcA. Our results confirm previous in vitro analyses on the regulation of PipX-PII and PipX-NtcA complexes by 2-oxoglutarate and on the regulation of PipX-PII by the ATP/ADP ratio, showing the disruption of PipX-NtcA complexes due to increased levels of ADP-bound PII in Synechococcus elongatus. The demonstration of a positive role of PII on PipX-NtcA complexes during their initial response to nitrogen starvation or the impact of a PipX point mutation on the activity of PipX-PII and PipX-NtcA reporters are further indications of the sensitivity of the system. This study reveals additional regulatory complexities in the PipX interaction network, opening a path for future research on cyanobacteria. Full article
(This article belongs to the Special Issue Advances in Protein-Protein Interactions 2.0)
15 pages, 754 KiB  
Article
Impact of Combined Electrolysis and Activated Sludge Process on Municipal Wastewater Treatment
by Miroslav Hutňan, Barbora Jankovičová, Ronald Zakhar and Nikola Šoltýsová
Processes 2024, 12(5), 868; https://doi.org/10.3390/pr12050868 (registering DOI) - 25 Apr 2024
Abstract
Electrochemical methods for the treatment of municipal and industrial wastewater are used either independently or in conjunction with biological methods for pretreatment or posttreatment of biologically treated wastewater. In our work, the combination of these processes was studied, where pre-electrolysis was used to [...] Read more.
Electrochemical methods for the treatment of municipal and industrial wastewater are used either independently or in conjunction with biological methods for pretreatment or posttreatment of biologically treated wastewater. In our work, the combination of these processes was studied, where pre-electrolysis was used to produce dissolved iron before the activation process. Electrolysis was also directly introduced into the activation using either iron or carbon electrodes. The surface of one iron electrode was 32.2 cm2, voltage at the electrodes was 21 V, and current was 270 mA. The surface of one carbon electrode was 7.54 cm2, current was 82.5 mA, and voltage at the electrodes was 21 V. Laboratory research on synthetic municipal wastewater treatment using a combination of electrolysis and activation processes showed that the use of iron electrodes increases the efficiency of phosphorus removal compared to its precipitation with iron salts. Electrolysis has shown a positive effect on the sedimentation properties of sludge and the destruction of filamentous microorganisms. Even though it negatively affected the respiration rates of activated sludge and the denitrification efficiency, it did not have a negative impact on the nitrification activity of sludge. Full article
(This article belongs to the Special Issue Municipal Wastewater Treatment and Removal of Micropollutants)
24 pages, 345 KiB  
Article
Beyond Colonial Politics of Identity: Being and Becoming Female Youth in Colonial Kenya
by Elizabeth Ngutuku and Auma Okwany
Genealogy 2024, 8(2), 47; https://doi.org/10.3390/genealogy8020047 (registering DOI) - 25 Apr 2024
Abstract
This paper draws on biographical research among the Akamba and the Luo communities in Eastern and Western Kenya, respectively. Our research explored how practices of adolescence as a process, an institution, and a performance of identity interact with colonial modernities and imaginaries in [...] Read more.
This paper draws on biographical research among the Akamba and the Luo communities in Eastern and Western Kenya, respectively. Our research explored how practices of adolescence as a process, an institution, and a performance of identity interact with colonial modernities and imaginaries in complex ways. The biographical research was carried out predominantly with women born in the late colonial period in Kenya. We provide critical reflections on the process and affordances of our embodied storytelling approach, which we position as an Africanist methodology and a decolonial research practice. This research and approach provided women with a space to narrate and perform their lived experience, potentially disrupting epistemic inequities that are embedded in the way research on growing up in the past is carried out. The discussions show how colonialism interacted with other factors, including gender and generational power, tradition, girls’ agency, and other life characteristics like poverty and family situation, in order to influence the lived experiences of women. Going beyond the narratives of victimhood that characterise coming of age in similar spaces, we present women’s emergent, incomplete, and incongruent agency. We position this agency as the diverse ways in which people come to terms with their difficult contexts. The discussion also points to the need for unsettling the settled thinking about girlhood and coming of age in specific historical spaces in the global South. Full article
(This article belongs to the Special Issue Decolonizing East African Genealogies of Power)
11 pages, 581 KiB  
Article
The Bacterial Meningitis Epidemic in Banalia in the Democratic Republic of Congo in 2021
by Andre Arsene Bita Fouda, Anderson Latt, Abdoulaye Sinayoko, Franck Fortune Roland Mboussou, Lorenzo Pezzoli, Katya Fernandez, Clement Lingani, Berthe Miwanda, Dorothée Bulemfu, Francis Baelongandi, Patrick Mbenga Likita, Marie-José Kikoo Bora, Marcel Sabiti, Gervais Leon Folefack Tengomo, Eugène Kabambi Kabangu, Guy Kalambayi Kabamba, Issifou Alassani, Muhamed-Kheir Taha, Ado Mpia Bwaka, Charles Shey Wiysonge and Benido Impoumaadd Show full author list remove Hide full author list
Vaccines 2024, 12(5), 461; https://doi.org/10.3390/vaccines12050461 (registering DOI) - 25 Apr 2024
Abstract
Background: The Banalia health zone in the Democratic Republic of Congo reported a meningitis epidemic in 2021 that evolved outside the epidemic season. We assessed the effects of the meningitis epidemic response. Methods: The standard case definition was used to identify cases. Care [...] Read more.
Background: The Banalia health zone in the Democratic Republic of Congo reported a meningitis epidemic in 2021 that evolved outside the epidemic season. We assessed the effects of the meningitis epidemic response. Methods: The standard case definition was used to identify cases. Care was provided to 2651 in-patients, with 8% of them laboratory tested, and reactive vaccination was conducted. To assess the effects of reactive vaccination and treatment with ceftriaxone, a statistical analysis was performed. Results: Overall, 2662 suspected cases of meningitis with 205 deaths were reported. The highest number of cases occurred in the 30–39 years age group (927; 38.5%). Ceftriaxone contributed to preventing deaths with a case fatality rate that decreased from 70.4% before to 7.7% after ceftriaxone was introduced (p = 0.001). Neisseria meningitidis W was isolated, accounting for 47/57 (82%), of which 92% of the strains belonged to the clonal complex 11. Reactive vaccination of individuals in Banalia aged 1–19 years with a meningococcal multivalent conjugate (ACWY) vaccine (Menactra®) coverage of 104.6% resulted in an 82% decline in suspected meningitis cases (incidence rate ratio, 0.18; 95% confidence interval, 0.02–0.80; p = 0.041). Conclusion: Despite late detection (two months) and reactive vaccination four months after crossing the epidemic threshold, interventions implemented in Banalia contributed to the control of the epidemic. Full article
(This article belongs to the Special Issue Vaccine Coverage and Safety in Immunization Programs)
Show Figures

Figure 1

21 pages, 3406 KiB  
Article
Optimizing Network Service Continuity with Quality-Driven Resource Migration
by Chaofan Chen, Yubo Song, Yu Jiang and Mingming Zhang
Electronics 2024, 13(9), 1666; https://doi.org/10.3390/electronics13091666 (registering DOI) - 25 Apr 2024
Abstract
Despite advances in security technology, it is impractical to entirely prevent intrusion threats. Consequently, developing effective service migration strategies is crucial to maintaining the continuity of network services. Current service migration strategies initiate the migration process only upon detecting a loss of service [...] Read more.
Despite advances in security technology, it is impractical to entirely prevent intrusion threats. Consequently, developing effective service migration strategies is crucial to maintaining the continuity of network services. Current service migration strategies initiate the migration process only upon detecting a loss of service functionality in the nodes, which increases the risk of service interruptions. Moreover, the migration decision-making process has not adequately accounted for the alignment between tasks and node resources, thereby amplifying the risk of system overload. To address these shortcomings, we introduce a Quality-Driven Resource Migration Strategy (QD-RMS). Specifically, QD-RMS initiates the migration process at an opportune moment, determined through an analysis of service quality. Subsequently, it employs a method combining Pareto optimality and the simulated annealing algorithm to identify the node most suitable for migration. This approach not only guarantees seamless service continuity but also ensures optimal resource distribution and load balancing. The experiments demonstrate that, in comparison with conventional migration strategies, QD-RMS achieves superior service quality and an approximate 20% increase in maximum task capacity. This substantiates the strategic superiority and technological advancement of the proposed strategy. Full article
(This article belongs to the Special Issue Knowledge Information Extraction Research)
15 pages, 2091 KiB  
Article
Appropriate Drought Training Induces Optimal Drought Tolerance by Inducing Stepwise H2O2 Homeostasis in Soybean
by Yuqian Shen, Lei Li, Peng Du, Xinghua Xing, Zhiwei Gu, Zhiming Yu, Yujia Tao and Haidong Jiang
Plants 2024, 13(9), 1202; https://doi.org/10.3390/plants13091202 (registering DOI) - 25 Apr 2024
Abstract
Soybean is considered one of the most drought-sensitive crops, and ROS homeostasis can regulate drought tolerance in these plants. Understanding the mechanism of H2O2 homeostasis and its regulatory effect on drought stress is important for improving drought tolerance in soybean. [...] Read more.
Soybean is considered one of the most drought-sensitive crops, and ROS homeostasis can regulate drought tolerance in these plants. Understanding the mechanism of H2O2 homeostasis and its regulatory effect on drought stress is important for improving drought tolerance in soybean. We used different concentrations of polyethylene glycol (PEG) solutions to simulate the progression from weak drought stress (0.2%, 0.5%, and 1% PEG) to strong drought stress (5% PEG). We investigated the responses of the soybean plant phenotype, ROS level, injury severity, antioxidant system, etc., to different weak drought stresses and subsequent strong drought stresses. The results show that drought-treated plants accumulated H2O2 for signaling and exhibited drought tolerance under the following stronger drought stress, among which the 0.5% PEG treatment had the greatest effect. Under the optimal treatment, there was qualitatively describable H2O2 homeostasis, characterized by a consistent increasing amplitude in H2O2 content compared with CK. The H2O2 signal formed under the optimum treatment induced the capacity of the antioxidant system to remove excess H2O2 to form a primary H2O2 homeostasis. The primary H2O2 homeostasis further induced senior H2O2 homeostasis under the following strong drought and maximized the improvement of drought tolerance. These findings might suggest that gradual drought training could result in stepwise H2O2 homeostasis to continuously improve drought tolerance. Full article
(This article belongs to the Special Issue Plant Stress Physiology and Molecular Biology—2nd Edition)
14 pages, 293 KiB  
Article
Quantum Information: Systems, Their States, and the Use of Variances
by Alain Deville and Yannick Deville
Information 2024, 15(5), 247; https://doi.org/10.3390/info15050247 (registering DOI) - 25 Apr 2024
Abstract
Quantum information mobilizes the description of quantum systems, their states, and their behavior. Since a measurement postulate introduced by von Neumann in 1932, if a quantum system has been prepared in two different mixed states represented by the same density operator ρ, [...] Read more.
Quantum information mobilizes the description of quantum systems, their states, and their behavior. Since a measurement postulate introduced by von Neumann in 1932, if a quantum system has been prepared in two different mixed states represented by the same density operator ρ, these preparations are said to have led to the same mixture. For more than 50 years, there has been a lack of consensus about this postulate. In a 2011 article, considering variances of spin components, Fratini and Hayrapetyan tried to show that this postulate is unjustified. The aim of the present paper is to discuss major points in this 2011 article and in their reply to a 2012 paper by Bodor and Diosi claiming that their analysis was irrelevant. Facing some ambiguities or inconsistencies in the 2011 paper and in the reply, we first try to guess their aim, establish results useful in this context, and finally discuss the use or misuse of several concepts implied in this debate. Full article
17 pages, 2865 KiB  
Article
Genome-Wide Identification, Phylogenetic and Expression Analysis of Expansin Gene Family in Medicago sativa L
by Yajing Li, Yangyang Zhang, Jing Cui, Xue Wang, Mingna Li, Lili Zhang and Junmei Kang
Int. J. Mol. Sci. 2024, 25(9), 4700; https://doi.org/10.3390/ijms25094700 (registering DOI) - 25 Apr 2024
Abstract
Expansins, a class of cell-wall-loosening proteins that regulate plant growth and stress resistance, have been studied in a variety of plant species. However, little is known about the Expansins present in alfalfa (Medicago sativa L.) due to the complexity of its tetraploidy. [...] Read more.
Expansins, a class of cell-wall-loosening proteins that regulate plant growth and stress resistance, have been studied in a variety of plant species. However, little is known about the Expansins present in alfalfa (Medicago sativa L.) due to the complexity of its tetraploidy. Based on the alfalfa (cultivar “XinjiangDaye”) reference genome, we identified 168 Expansin members (MsEXPs). Phylogenetic analysis showed that MsEXPs consist of four subfamilies: MsEXPAs (123), MsEXPBs (25), MsEXLAs (2), and MsEXLBs (18). MsEXPAs, which account for 73.2% of MsEXPs, and are divided into twelve groups (EXPA-I–EXPA-XII). Of these, EXPA-XI members are specific to Medicago trunctula and alfalfa. Gene composition analysis revealed that the members of each individual subfamily shared a similar structure. Interestingly, about 56.3% of the cis-acting elements were predicted to be associated with abiotic stress, and the majority were MYB- and MYC-binding motifs, accounting for 33.9% and 36.0%, respectively. Our short-term treatment (≤24 h) with NaCl (200 mM) or PEG (polyethylene glycol, 15%) showed that the transcriptional levels of 12 MsEXPs in seedlings were significantly altered at the tested time point(s), indicating that MsEXPs are osmotic-responsive. These findings imply the potential functions of MsEXPs in alfalfa adaptation to high salinity and/or drought. Future studies on MsEXP expression profiles under long-term (>24 h) stress treatment would provide valuable information on their involvement in the response of alfalfa to abiotic stress. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
13 pages, 495 KiB  
Article
Germline Genetic Mutations in Adult Patients with Sarcoma: Insight into the Middle East Genetic Landscape
by Ramiz Abu-Hijlih, Baha Sharaf, Samer Salah, Hira Bani Hani, Mohammad Alqaisieh, Abdulla Alzibdeh, Layan Ababneh, Suleiman Mahafdah and Hikmat Abdel-Razeq
Cancers 2024, 16(9), 1668; https://doi.org/10.3390/cancers16091668 (registering DOI) - 25 Apr 2024
Abstract
Data on germline mutations in soft tissue and bone sarcomas are scarce. We sought to identify the prevalence of germline mutations in adult sarcoma patients treated at a tertiary cancer center. Newly diagnosed patients were offered germline genetic testing via an 84-gene panel. [...] Read more.
Data on germline mutations in soft tissue and bone sarcomas are scarce. We sought to identify the prevalence of germline mutations in adult sarcoma patients treated at a tertiary cancer center. Newly diagnosed patients were offered germline genetic testing via an 84-gene panel. The prevalence of pathogenic germline variants (PGVs) and their association with disease-, and patient- related factors are reported. A total of 87 patients were enrolled, the median age was 48 (19–78) years, and 47 (54%) were females. Gastrointestinal stromal tumors (n = 12, 13.8%), liposarcoma (n = 10, 11.5%), and Ewing sarcoma (n = 10, 11.5%) were the main subtypes. A total of 20 PGVs were detected in 18 (20.7%) patients. Variants of uncertain significance, in the absence of PGVs, were detected in 40 (45.9%) patients. Young age (p = 0.031), presence of a second primary cancer (p = 0.019), and female gender (p = 0.042) were correlated with the presence of PGVs. All identified PGVs have potential clinical actionability and cascade testing, and eight (44.44%) suggested eligibility for a targeted therapy. Almost one in five adult patients with soft tissue and bone sarcomas harbor pathogenic or likely pathogenic variants. Many of these variants are potentially actionable, and almost all have implications on cancer screening and family counselling. In this cohort from the Middle East, younger age, presence of a second primary tumor, and female gender were significantly associated with higher PGVs rates. Larger studies able to correlate treatment outcomes with genetic variants are highly needed. Full article
(This article belongs to the Special Issue Recent Advances in Rare Cancers: From Bench to Bedside and Back)
15 pages, 972 KiB  
Communication
Detecting Class 1 Integrons and Their Variable Regions in Escherichia coli Whole-Genome Sequences Reported from Andean Community Countries
by María Nicole Solis, Karen Loaiza, Lilibeth Torres-Elizalde, Ivan Mina, Miroslava Anna Šefcová and Marco Larrea-Álvarez
Antibiotics 2024, 13(5), 394; https://doi.org/10.3390/antibiotics13050394 (registering DOI) - 25 Apr 2024
Abstract
Various genetic elements, including integrons, are known to contribute to the development of antimicrobial resistance. Class 1 integrons have been identified in E. coli isolates and are associated with multidrug resistance in countries of the Andean Community. However, detailed information on the gene [...] Read more.
Various genetic elements, including integrons, are known to contribute to the development of antimicrobial resistance. Class 1 integrons have been identified in E. coli isolates and are associated with multidrug resistance in countries of the Andean Community. However, detailed information on the gene cassettes located on the variable regions of integrons is lacking. Here, we investigated the presence and diversity of class 1 integrons, using an in silico approach, in 2533 whole-genome sequences obtained from EnteroBase. IntFinder v1.0 revealed that almost one-third of isolates contained these platforms. Integron-bearing isolates were associated with environmental, food, human, and animal origins reported from all countries under scrutiny. Moreover, they were identified in clones known for their pathogenicity or multidrug resistance. Integrons carried cassettes associated with aminoglycoside (aadA), trimethoprim (dfrA), cephalosporin (blaOXA; blaDHA), and fluoroquinolone (aac(6′)-Ib-cr; qnrB) resistance. These platforms showed higher diversity and larger numbers than previously reported. Moreover, integrons carrying more than three cassettes in their variable regions were determined. Monitoring the prevalence and diversity of genetic elements is necessary for recognizing emergent patterns of resistance in pathogenic bacteria, especially in countries where various factors are recognized to favor the selection of resistant microorganisms. Full article
(This article belongs to the Special Issue Genomic Analysis of Antimicrobial Drug-Resistant Bacteria)
24 pages, 7162 KiB  
Article
How to Personalize General Anesthesia—A Prospective Theoretical Approach to Conformational Changes of Halogenated Anesthetics in Fire Smoke Poisoning
by Flavius Nicușor Truicu, Roni Octavian Damian, Mihai Alexandru Butoi, Vlad Ionuț Belghiru, Luciana Teodora Rotaru, Monica Puticiu and Renata Maria Văruț
Int. J. Mol. Sci. 2024, 25(9), 4701; https://doi.org/10.3390/ijms25094701 (registering DOI) - 25 Apr 2024
Abstract
Smoke intoxication is a central event in mass burn incidents, and toxic smoke acts at different levels of the body, blocking breathing and oxygenation. The majority of these patients require early induction of anesthesia to preserve vital functions. We studied the influence of [...] Read more.
Smoke intoxication is a central event in mass burn incidents, and toxic smoke acts at different levels of the body, blocking breathing and oxygenation. The majority of these patients require early induction of anesthesia to preserve vital functions. We studied the influence of hemoglobin (HMG) and myoglobin (MGB) blockade by hydrochloric acid (HCl) in an interaction model with gaseous anesthetics using molecular docking techniques. In the next part of the study, molecular dynamics (MD) simulations were performed on the top-scoring ligand–receptor complexes to investigate the stability of the ligand–receptor complexes and the interactions between ligands and receptors in more detail. Through docking analysis, we observed that hemoglobin creates more stable complexes with anesthetic gases than myoglobin. Intoxication with gaseous hydrochloric acid produces conformational and binding energy changes of anesthetic gases to the substrate (both the pathway and the binding site), the most significant being recorded in the case of desflurane and sevoflurane, while for halothane and isoflurane, they remain unchanged. According to our theoretical model, the selection of anesthetic agents for patients affected by fire smoke containing hydrochloric acid is critical to ensure optimal anesthetic effects. In this regard, our model suggests that halothane and isoflurane are the most suitable choices for predicting the anesthetic effects in such patients when compared to sevoflurane and desflurane. Full article
(This article belongs to the Special Issue Molecular Toxicology of New Drugs: New Insights)
19 pages, 1548 KiB  
Article
Research on the Effect of Structural Parameters on Cavitation Performance of Shear Hydrodynamic Cavitation Generator
by Fengxia Lyu, Ming Tang, Faqi Zhou, Xintong Zhang, Saiyue Han and Sheng Zhang
Appl. Sci. 2024, 14(9), 3676; https://doi.org/10.3390/app14093676 (registering DOI) - 25 Apr 2024
Abstract
The method of cavitation is increasingly applied in water environmental protection. Based on the numerical simulation method, a study on the structural parameters of the shear-type hydrodynamic cavitation generators for wastewater treatment is proceeded. The internal flow field is described by employing the [...] Read more.
The method of cavitation is increasingly applied in water environmental protection. Based on the numerical simulation method, a study on the structural parameters of the shear-type hydrodynamic cavitation generators for wastewater treatment is proceeded. The internal flow field is described by employing the mixed multiphase flow model and the Zwart cavitation model. Experiments were conducted by applying the wastewater from a dyeing factory as the medium. The degradation rate of COD in water characterizes the cavitation performance of the hydrodynamic cavitation generator, and the rationality of the numerical simulation approach is validated. The findings indicate that different structural parameters have a great influence on the cavitation performance. The appropriate number of tooth rows creates a flow field with a greater vapor and velocity than the other parameters. The number of teeth in a single row, the outer diameter of the hydrodynamic cavitation generator and the tooth bevel angle also affect the cavitation performance to some extent, and there is an optimal value. The study provides a reference for the applicability of a numerical simulation of the flow field inside the hydrodynamic cavitation generator and the structural optimization of the rotary hydrodynamic cavitation generator. Full article
(This article belongs to the Special Issue Flow Analysis and Structural Control of Fluid Machinery)
21 pages, 1259 KiB  
Article
New Insights into the Biological Functions of Essential TsaB/YeaZ Protein in Staphylococcus aureus
by Haiyong Guo, Ting Lei, Junshu Yang, Yue Wang, Yifan Wang and Yinduo Ji
Antibiotics 2024, 13(5), 393; https://doi.org/10.3390/antibiotics13050393 (registering DOI) - 25 Apr 2024
Abstract
TsaB/YeaZ represents a promising target for novel antibacterial agents due to its indispensable role in bacterial survival, high conservation within bacterial species, and absence of eukaryotic homologs. Previous studies have elucidated the role of the essential staphylococcal protein, TsaB/YeaZ, in binding DNA to [...] Read more.
TsaB/YeaZ represents a promising target for novel antibacterial agents due to its indispensable role in bacterial survival, high conservation within bacterial species, and absence of eukaryotic homologs. Previous studies have elucidated the role of the essential staphylococcal protein, TsaB/YeaZ, in binding DNA to mediate the transcription of the ilv-leu operon, responsible for encoding key enzymes involved in the biosynthesis of branched-chain amino acids—namely isoleucine, leucine, and valine (ILV). However, the regulation of ILV biosynthesis does not account for the essentiality of TsaB/YeaZ for bacterial growth. In this study, we investigated the impact of TsaB/YeaZ depletion on bacterial morphology and gene expression profiles using electron microscopy and deep transcriptomic analysis, respectively. Our results revealed significant alterations in bacterial size and surface smoothness upon TsaB/YeaZ depletion. Furthermore, we pinpointed specific genes and enriched biological pathways significantly affected by TsaB/YeaZ during the early and middle exponential phases and early stationary phases of growth. Crucially, our research uncovered a regulatory role for TsaB/YeaZ in bacterial autolysis. These discoveries offer fresh insights into the multifaceted biological functions of TsaB/YeaZ within S. aureus. Full article
(This article belongs to the Special Issue Genomic Analysis of Antimicrobial Drug-Resistant Bacteria)
12 pages, 1385 KiB  
Article
Sustainable and Cost-Efficient Production of Micro-Patterned Reduced Graphene Oxide on Graphene Oxide Films
by Satam Alotibi, Talal F. Qahtan, Amani M. Alansi, Taoreed O. Owolabi, Salah T. Hameed, Naveed Afzal, Sadia Bilal and Dina Salah
Coatings 2024, 14(5), 534; https://doi.org/10.3390/coatings14050534 (registering DOI) - 25 Apr 2024
Abstract
This study tackles the critical demand for sustainable synthesis methods of reduced graphene oxide (rGO), highlighting the environmental drawbacks of conventional chemical processes. We introduce a novel, green synthesis technique involving the irradiation of a 500 eV argon ion beam, which not only [...] Read more.
This study tackles the critical demand for sustainable synthesis methods of reduced graphene oxide (rGO), highlighting the environmental drawbacks of conventional chemical processes. We introduce a novel, green synthesis technique involving the irradiation of a 500 eV argon ion beam, which not only facilitates the creation of micro-patterned rGO on a graphene oxide (GO) film but also enables simultaneous material characterization and patterning. By adjusting the irradiation exposure time between 0 and 80 s, we achieve meticulous control over the attributes and the reduction process of the material. The use of X-ray photoelectron spectroscopy (XPS) allows for real-time monitoring of the reduction from GO to rGO, evidenced by a notable reduction in the intensities of C-O, C=O, and O-C=O bonds, and an increase in C-C bond intensities, indicating a significant reduction level. Our research demonstrates the efficient production of eco-friendly rGO using precise, controlled argon ion beam irradiation, proving its advantages over traditional methods. These results contribute to the development of sustainable material science technologies, with potential applications in electronics, energy storage, and more. Full article
(This article belongs to the Special Issue Advances in Low-Cost Energy Materials and Thin Films)
11 pages, 284 KiB  
Article
AKT, p-AKT, ERK1/2 and p-ERK1/2 in Mural Granulosa Cells Are Not Correlated to Different Ovarian Stimulation Protocols in Patients Undergoing Assisted Reproductive Treatment
by Giovanni Ruvolo, Domenica Matranga, Maria Magdalena Barreca and Liana Bosco
Life 2024, 14(5), 554; https://doi.org/10.3390/life14050554 (registering DOI) - 25 Apr 2024
Abstract
(1) Background: In this paper we aim to study the relationship between the expression levels of molecules involved in apoptotic/survival pathways, considered as molecular markers of oocyte competence (i.e., AKT, p-AKT, ERK1/2, and p-ERK1/2) in mural granulosa cells (MGCs) and the administration of [...] Read more.
(1) Background: In this paper we aim to study the relationship between the expression levels of molecules involved in apoptotic/survival pathways, considered as molecular markers of oocyte competence (i.e., AKT, p-AKT, ERK1/2, and p-ERK1/2) in mural granulosa cells (MGCs) and the administration of r-FSH alone or combined with exogenous r-LH, in ovarian stimulation protocol. Moreover, we aim to evaluate oocyte competence by comparing normally cleaved embryos that were transferred in the uterus, with embryos that were arrested during in vitro culture. (2) Methods: The study included 34 normo-responder women undergoing ICSI procedures. All subjects were divided into two groups. Group A consisted of 18 women stimulated with r-FSH and used as a control group; Group B consisted of 14 women stimulated with r-FSH combined with r-LH. The MGCs were obtained from individual follicles. Immunoblot analyses were carried out to analyze the AKT, p-AKT, ERK1/2, and p-ERK1/2 levels in MGCs and to correlate them with the ovarian stimulation protocol. Furthermore, the oocyte competence was evaluated, for each follicle, according to the development of the embryo during in vitro culture and the pregnancy outcome. (3) Results: We found no significant difference in the levels of molecules in isolated MGCs between groups A and B. These results, in light of our previous research, suggest for the first time, to our knowledge, that cumulus cells and mural granulosa cells in the same follicle show different expression levels of molecules involved in the apoptotic mechanism. (4) Conclusions: Our results could clarify some controversial data in the literature where cumulative cell pools of cumulus and granulosa were analyzed, described as ovarian follicle cells, and used as markers of oocyte competence. In this paper, we found evidence that cumulus and granulosa cells need to be analyzed separately. Full article
(This article belongs to the Special Issue Biological and Clinical Research of Germ Cells)
20 pages, 680 KiB  
Review
Methods and Techniques Supporting Energy and Media Savings in Maintenance of Public Transport Buses—State of the Art and Recommendations
by Andrzej Wieczorek, Kinga Stecuła and Wieslaw Wes Grebski
Energies 2024, 17(9), 2051; https://doi.org/10.3390/en17092051 (registering DOI) - 25 Apr 2024
Abstract
In the article, the authors discussed the topic of energy and media savings in a public transport company. The article is of a review nature, referring to 100 sources, including scientific papers, books, conference proceedings, and websites. In the first part, a detailed [...] Read more.
In the article, the authors discussed the topic of energy and media savings in a public transport company. The article is of a review nature, referring to 100 sources, including scientific papers, books, conference proceedings, and websites. In the first part, a detailed literature review on environmental protection problems in road transport and methods of solving them was conducted. Subsequently, the authors reviewed the literature content on maintenance as a pro-environmental activity in transport companies. The great accent was paid to the problem of saving energy and media in the maintenance of public transport buses. Based on the literature and knowledge, the authors proposed the possibilities of conducting a rational method of managing the operation and maintenance of buses from the point of view of environmental protection, based on the strategy of predictive bus maintenance. Full article
(This article belongs to the Section C: Energy Economics and Policy)
21 pages, 1797 KiB  
Article
Benefits of Combined Fluorescence Lifetime Imaging Microscopy and Fluorescence Correlation Spectroscopy for Biomedical Studies Demonstrated by Using a Liposome Model System
by Kristina Bruun, Hans-Gerd Löhmannsröben and Carsten Hille
Biophysica 2024, 4(2), 207-227; https://doi.org/10.3390/biophysica4020015 (registering DOI) - 25 Apr 2024
Abstract
Drug delivery systems play a pivotal role in targeted pharmaceutical transport and controlled release at specific sites. Liposomes, commonly used as drug carriers, constitute a fundamental part of these systems. Moreover, the drug–liposome model serves as a robust platform for investigating interaction processes [...] Read more.
Drug delivery systems play a pivotal role in targeted pharmaceutical transport and controlled release at specific sites. Liposomes, commonly used as drug carriers, constitute a fundamental part of these systems. Moreover, the drug–liposome model serves as a robust platform for investigating interaction processes at both cellular and molecular levels. To advance our understanding of drug carrier uptake mechanisms, we employed fluorescence lifetime imaging microscopy (FLIM) and fluorescence correlation spectroscopy (FCS), leveraging the unique benefits of two-photon (2P) excitation. Our approach utilized giant unilamellar vesicles (GUVs) as a simplified model system for cell membranes, labelled with the amphiphilic fluorescent dye 3,3′-dioctadecyloxa-carbocyanine (DiOC18(3)). Additionally, large unilamellar vesicles (LUVs) functioned as a drug carrier system, incorporating the spectrally distinct fluorescent sulforhodamine 101 (SRh101) as a surrogate drug. The investigation emphasized the diverse interactions between GUVs and LUVs based on the charged lipids employed. We examined the exchange kinetics and structural alterations of liposome carriers during the uptake process. Our study underscores the significance of employing 2P excitation in conjunction with FLIM and FCS. This powerful combination offers a valuable methodological approach for studying liposome interactions, positioning them as an exceptionally versatile model system with a distinct technical advantage. Full article

Open Access Journals

Browse by Indexing Browse by Subject Selected Journals
Back to TopTop