The 2023 MDPI Annual Report has
been released!
 
6 pages, 516 KiB  
Editorial
Plant-Growth-Promoting Bacteria
by Carmen Bianco
Plants 2024, 13(10), 1323; https://doi.org/10.3390/plants13101323 (registering DOI) - 11 May 2024
Abstract
Global food-production levels may soon be insufficient for feeding the population, and changing climatic conditions could further limit agri-food production [...] Full article
(This article belongs to the Special Issue Plant Growth Promoting Bacteria)
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15 pages, 10284 KiB  
Article
Identifying the Quantitative Trait Locus and Candidate Genes of Traits Related to Milling Quality in Rice via a Genome-Wide Association Study
by Changmin Hu, Xinru Li, Mengyuan Zhang, Chunyu Jing, Mei Hai, Jiaming Shen, Qing Xu, Xiaojing Dang, Yingyao Shi, Erbao Liu and Jianhua Jiang
Plants 2024, 13(10), 1324; https://doi.org/10.3390/plants13101324 (registering DOI) - 11 May 2024
Abstract
Milling quality directly affects production efficiency in rice, which is closely related to the brown rice recovery (BRR), the milled rice recovery (MRR) and the head milled rice recovery (HMRR). The present study investigated these three traits in 173 germplasms in two environments, [...] Read more.
Milling quality directly affects production efficiency in rice, which is closely related to the brown rice recovery (BRR), the milled rice recovery (MRR) and the head milled rice recovery (HMRR). The present study investigated these three traits in 173 germplasms in two environments, finding abundant phenotypic variation. Three QTLs for BRR, two for MRR, and three for HMRR were identified in a genome-wide association study, five of these were identified in previously reported QTLs and three were newly identified. By combining the linkage disequilibrium (LD) analyses, the candidate gene LOC_Os05g08350 was identified. It had two haplotypes with significant differences and Hap 2 increased the BRR by 4.40%. The results of the qRT-PCR showed that the expression of LOC_Os05g08350 in small-BRR accessions was significantly higher than that in large-BRR accessions at Stages 4–5 of young panicle development, reaching the maximum value at Stage 5. The increase in thickness of the spikelet hulls of the accession carrying LOC_Os05g08350TT occurred due to an increase in the cell width and the cell numbers in cross-sections of spikelet hulls. These results help to further clarify the molecular genetic mechanism of milling-quality-related traits and provide genetic germplasm materials for high-quality breeding in rice. Full article
28 pages, 4733 KiB  
Review
Microplastics in Water: A Review of Characterization and Removal Methods
by Yun Li, Ping Chen, Yalan Tang, Yanjing Yang, Chengyun Zhou, Jiaqi Bu and Shian Zhong
Sustainability 2024, 16(10), 4033; https://doi.org/10.3390/su16104033 (registering DOI) - 11 May 2024
Abstract
Microplastics (MPs), as an emerging persistent pollutant, exist and accumulate in the environment, which has garnered them considerable global attention. While the origin, dispersion, distribution, and impact of MPs have been extensively documented, the characterization and removal strategies for MPs present ongoing challenges. [...] Read more.
Microplastics (MPs), as an emerging persistent pollutant, exist and accumulate in the environment, which has garnered them considerable global attention. While the origin, dispersion, distribution, and impact of MPs have been extensively documented, the characterization and removal strategies for MPs present ongoing challenges. In this literature review, we introduce in detail the advantages and disadvantages of seven characterization methods, from macroscopic to microscopic, from visual observation to microscopic characterization, and discuss their scope of application. In addition, 12 treatment schemes were summarized from the three treatment directions of physics, chemistry, and biology, including filtration, adsorption, extraction, magnetic separation, oil film separation, Fenton oxidation, electrochemical oxidation, persulfate advanced oxidation, photocatalytic oxidation, coagulation, electrocoagulation, foam flotation, anaerobic–anoxic–aerobic activated sludge, enzymatic degradation, bacterial degradation, and fungal degradation. Additionally, we present a critical assessment of the advantages and drawbacks associated with these removal strategies. Building upon the findings of our research team, we propose a novel approach to degrade MPs, which combines three-dimensional electrocatalytic oxidation technology with persulfate advanced oxidation technology. This advanced oxidation technology achieves 100% degradation of antibiotics in water, can degrade large molecules into environmentally harmless small molecules, and should also be a very good strategy for the degradation of MPs. Compared with two-dimensional electrocatalytic technology, the degradation efficiency is higher and the degradation cost is lower This review intends to propel further advancements for addressing the issue of MP pollution. Full article
6 pages, 663 KiB  
Short Note
8(S)-[(1R,2S,5R)-2-Isopropyl-5-methylcyclohexyloxy]-3,4-dihydro-2H-[1,4]dithiepino[2,3-c]furan-6(8H)-one
by Alsu M. Khabibrakhmanova, Enze S. Rabbanieva, Darya P. Gerasimova, Liliya Z. Latypova and Almira R. Kurbangalieva
Molbank 2024, 2024(2), M1820; https://doi.org/10.3390/M1820 (registering DOI) - 11 May 2024
Abstract
The interaction of propane-1,3-dithiol with the chiral bis-thioether, which combines two 2(5H)-furanone moieties, bridged through their carbon atoms C(4) by the propane-1,3-dithiol fragment, in DMF in the presence of potassium hydroxide or cesium carbonate resulted in the formation of an [...] Read more.
The interaction of propane-1,3-dithiol with the chiral bis-thioether, which combines two 2(5H)-furanone moieties, bridged through their carbon atoms C(4) by the propane-1,3-dithiol fragment, in DMF in the presence of potassium hydroxide or cesium carbonate resulted in the formation of an optically active fused bicyclic sulfur heterocycle, possessing 1,4-dithiepine and unsaturated γ-lactone moieties. The studied reaction follows an unexpected pathway in a basic medium with the thiolate–thiolate exchange. The structure of the novel heterocycle of the 1,4-dithiepinofuranone series is characterized by single-crystal X-ray diffraction. Full article
(This article belongs to the Collection Heterocycle Reactions)
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12 pages, 1855 KiB  
Article
IQGAP1 Regulates Actin Polymerization and Contributes to Bleomycin-Induced Lung Fibrosis
by Tanjina Akter, Ilia Atanelishvili, Richard M. Silver and Galina S. Bogatkevich
Int. J. Mol. Sci. 2024, 25(10), 5244; https://doi.org/10.3390/ijms25105244 (registering DOI) - 11 May 2024
Abstract
We previously found IQ motif containing GTPase activating protein (IQGAP1) to be consistently elevated in lung fibroblasts (LF) isolated from patients with scleroderma (systemic sclerosis, SSc)-associated interstitial lung disease (ILD) and reported that IQGAP1 contributed to SSc by regulating expression and organization of [...] Read more.
We previously found IQ motif containing GTPase activating protein (IQGAP1) to be consistently elevated in lung fibroblasts (LF) isolated from patients with scleroderma (systemic sclerosis, SSc)-associated interstitial lung disease (ILD) and reported that IQGAP1 contributed to SSc by regulating expression and organization of α-smooth muscle actin (SMA) in LF. The aim of this study was to compare the development of ILD in the presence and absence of IQGAP1. Pulmonary fibrosis was induced in IQGAP1 knockout (KO) and wild-type (WT) mice by a single-intratracheal instillation of bleomycin. Two and three weeks later, mice were euthanized and investigated. We observed that the IQGAP1 KO mouse was characterized by a reduced rate of actin polymerization with reduced accumulation of actin in the lung compared to the WT mouse. After exposure to bleomycin, the IQGAP1 KO mouse demonstrated decreased contractile activity of LF, reduced expression of SMA, TGFβ, and collagen, and lowered overall fibrosis scores compared to the WT mouse. The numbers of inflammatory cells and expression of pro-inflammatory cytokines in lung tissue were not significantly different between IQGAP1 KO and WT mice. We conclude that IQGAP1 plays an important role in the development of lung fibrosis induced by bleomycin, and the absence of IQGAP1 reduces the contractile activity of lung fibroblast and bleomycin-induced pulmonary fibrosis. Thus, IQGAP1 may be a potential target for novel anti-fibrotic therapies for lung fibrosis. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
15 pages, 1886 KiB  
Article
Improving Time Series Regression Model Accuracy via Systematic Training Dataset Augmentation and Sampling
by Robin Ströbel, Marcus Mau, Alexander Puchta and Jürgen Fleischer
Mach. Learn. Knowl. Extr. 2024, 6(2), 1072-1086; https://doi.org/10.3390/make6020049 (registering DOI) - 11 May 2024
Abstract
This study addresses a significant gap in the field of time series regression modeling by highlighting the central role of data augmentation in improving model accuracy. The primary objective is to present a detailed methodology for systematic sampling of training datasets through data [...] Read more.
This study addresses a significant gap in the field of time series regression modeling by highlighting the central role of data augmentation in improving model accuracy. The primary objective is to present a detailed methodology for systematic sampling of training datasets through data augmentation to improve the accuracy of time series regression models. Therefore, different augmentation techniques are compared to evaluate their impact on model accuracy across different datasets and model architectures. In addition, this research highlights the need for a standardized approach to creating training datasets using multiple augmentation methods. The lack of a clear framework hinders the easy integration of data augmentation into time series regression pipelines. Our systematic methodology promotes model accuracy while providing a robust foundation for practitioners to seamlessly integrate data augmentation into their modeling practices. The effectiveness of our approach is demonstrated using process data from two milling machines. Experiments show that the optimized training dataset improves the generalization ability of machine learning models in 86.67% of the evaluated scenarios. However, the prediction accuracy of models trained on a sufficient dataset remains largely unaffected. Based on these results, sophisticated sampling strategies such as Quadratic Weighting of multiple augmentation approaches may be beneficial. Full article
(This article belongs to the Section Data)
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14 pages, 5431 KiB  
Article
Marine Stratus—A Boundary-Layer Model
by Peter A. Taylor
Atmosphere 2024, 15(5), 585; https://doi.org/10.3390/atmos15050585 (registering DOI) - 11 May 2024
Abstract
A relatively simple 1D RANS model of the time evolution of the planetary boundary layer is extended to include water vapor and cloud droplets plus transfers between them. Radiative fluxes and flux divergence are also included. An underlying ocean surface is treated as [...] Read more.
A relatively simple 1D RANS model of the time evolution of the planetary boundary layer is extended to include water vapor and cloud droplets plus transfers between them. Radiative fluxes and flux divergence are also included. An underlying ocean surface is treated as a source of water vapor and as a sink for cloud or fog droplets. With a constant sea surface temperature and a steady wind, initially dry or relatively dry air will moisten, starting at the surface. Turbulent boundary layer mixing will then lead towards a layer with a well-mixed potential temperature (and so temperature decreasing with height) and well-mixed water vapor mixing ratio. As a result, the air will, sooner or later, become saturated at some level, and a stratus cloud will form. Full article
(This article belongs to the Special Issue Aerosol-Cloud Interactions in Marine Warm Clouds)
15 pages, 666 KiB  
Article
Glucose-to-Lymphocyte Ratio (GLR) as an Independent Prognostic Factor in Patients with Resected Pancreatic Ductal Adenocarcinoma—Cohort Study
by Su-Hyeong Park, In-Cheon Kang, Seung-Soo Hong, Ha-Yan Kim, Ho-Kyoung Hwang and Chang-Moo Kang
Cancers 2024, 16(10), 1844; https://doi.org/10.3390/cancers16101844 (registering DOI) - 11 May 2024
Abstract
Background: We retrospectively evaluated the usefulness of an elevated glucose-to-lymphocyte ratio (GLR) as a sensitive prognostic biomarker of disease-specific survival in 338 patients who underwent surgical resection of pancreatic ductal adenocarcinoma (PDAC). Methods: The optimal GLR cutoff value was determined using the method [...] Read more.
Background: We retrospectively evaluated the usefulness of an elevated glucose-to-lymphocyte ratio (GLR) as a sensitive prognostic biomarker of disease-specific survival in 338 patients who underwent surgical resection of pancreatic ductal adenocarcinoma (PDAC). Methods: The optimal GLR cutoff value was determined using the method of Contal and O’Quigley. Patient demographics, clinical information, and imaging data were analyzed to identify preoperative predictors of long-term survival outcomes. Results: Elevated GLR correlated significantly with aggressive tumor biologic behaviors, such as a high carbohydrate antigen (CA) 19-9 level (p = 0.003) and large tumor size (p = 0.011). Multivariate analysis identified (1) GLR > 92.72 [hazard ratio (HR) = 2.475, p < 0.001], (2) CA 19-9 level > 145.35 (HR = 1.577, p = 0.068), and (3) symptoms (p = 0.064) as independent predictors of long-term, cancer-specific survival. These three risk factors were used to group patients into groups 1 (0 factors), 2 (1–2 factors), and 3 (3 factors), which corresponded to significantly different 5-year overall survival rates (50.2%, 34.6%, and 11.7%, respectively; p < 0.001). Conclusions: An elevated preoperative GLR is associated with aggressive tumor characteristics and is an independent predictor of poor postoperative prognosis in patients with PDAC. Further prospective studies are required to verify these findings. Full article
(This article belongs to the Section Cancer Biomarkers)
16 pages, 1807 KiB  
Article
Quasi-Configurations Derived by Special Arrangements of Lines
by Stefano Innamorati
Axioms 2024, 13(5), 321; https://doi.org/10.3390/axioms13050321 (registering DOI) - 11 May 2024
Abstract
A quasi-configuration is a point–line incidence structure in which each point is incident with at least three lines and each line is incident with at least three points. We investigate derived quasi-configurations that arise both by duality and intersecting lines of three special [...] Read more.
A quasi-configuration is a point–line incidence structure in which each point is incident with at least three lines and each line is incident with at least three points. We investigate derived quasi-configurations that arise both by duality and intersecting lines of three special arrangements of lines. Sets with few intersection numbers are provided. Full article
(This article belongs to the Special Issue Theory of Curves and Knots with Applications)
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17 pages, 734 KiB  
Article
Metallo-Glycodendrimeric Materials against Enterotoxigenic Escherichia coli
by Aly El Riz, Armelle Tchoumi Neree, Leila Mousavifar, René Roy, Younes Chorfi and Mircea Alexandru Mateescu
Microorganisms 2024, 12(5), 966; https://doi.org/10.3390/microorganisms12050966 (registering DOI) - 11 May 2024
Abstract
Conjugation of carbohydrates to nanomaterials has been extensively studied and recognized as an alternative in the biomedical field. Dendrimers synthesized with mannose at the end group and with entrapped zero-valent copper/silver could be a potential candidate against bacterial proliferation. This study is aimed [...] Read more.
Conjugation of carbohydrates to nanomaterials has been extensively studied and recognized as an alternative in the biomedical field. Dendrimers synthesized with mannose at the end group and with entrapped zero-valent copper/silver could be a potential candidate against bacterial proliferation. This study is aimed at investigating the bactericidal activity of metal-glycodendrimers. The Cu(I)-catalyzed azide–alkyne cycloaddition (CuAAC) reaction was used to synthesize a new mannosylated dendrimer containing 12 mannopyranoside residues in the periphery. The enterotoxigenic Escherichia coli fimbriae 4 (ETEC:F4) viability, measured at 600 nm, showed the half-inhibitory concentration (IC50) of metal-free glycodendrimers (D), copper-loaded glycodendrimers (D:Cu) and silver-loaded glycodendrimers (D:Ag) closed to 4.5 × 101, 3.5 × 101 and to 1.0 × 10−2 µg/mL, respectively, and minimum inhibitory concentration (MIC) of D, D:Cu and D:Ag of 2.0, 1.5 and 1.0 × 10−4 µg/mL, respectively. The release of bacteria contents onto broth and the inhibition of ETEC:F4 biofilm formation increased with the number of metallo-glycodendrimer materials, with a special interest in silver-containing nanomaterial, which had the highest activity, suggesting that glycodendrimer-based materials interfered with bacteria-bacteria or bacteria–polystyrene interactions, with bacteria metabolism and can disrupt bacteria cell walls. Our findings identify metal–mannose-dendrimers as potent bactericidal agents and emphasize the effect of entrapped zero-valent metal against ETEC:F4. Full article
(This article belongs to the Special Issue Antimicrobial Properties of Nanoparticle)
12 pages, 324 KiB  
Review
A Review of Resistance Mechanisms to Bruton’s Kinase Inhibitors in Chronic Lymphocytic Leukemia
by Kamil Wiśniewski and Bartosz Puła
Int. J. Mol. Sci. 2024, 25(10), 5246; https://doi.org/10.3390/ijms25105246 (registering DOI) - 11 May 2024
Abstract
Bruton’s Tyrosine Kinase (BTK) inhibitors have become one of the most vital drugs in the therapy of chronic lymphocytic leukemia (CLL). Inactivation of BTK disrupts the B-cell antigen receptor (BCR) signaling pathway, which leads to the inhibition of the proliferation and survival of [...] Read more.
Bruton’s Tyrosine Kinase (BTK) inhibitors have become one of the most vital drugs in the therapy of chronic lymphocytic leukemia (CLL). Inactivation of BTK disrupts the B-cell antigen receptor (BCR) signaling pathway, which leads to the inhibition of the proliferation and survival of CLL cells. BTK inhibitors (BTKi) are established as leading drugs in the treatment of both treatment-naïve (TN) and relapsed or refractory (R/R) CLL. Furthermore, BTKi demonstrate outstanding efficacy in high-risk CLL, including patients with chromosome 17p deletion, TP53 mutations, and unmutated status of the immunoglobulin heavy-chain variable region (IGHV) gene. Ibrutinib is the first-in-class BTKi which has changed the treatment landscape of CLL. Over the last few years, novel, covalent (acalabrutinib, zanubrutinib), and non-covalent (pirtobrutinib) BTKi have been approved for the treatment of CLL. Unfortunately, continuous therapy with BTKi contributes to the acquisition of secondary resistance leading to clinical relapse. In recent years, it has been demonstrated that the predominant mechanisms of resistance to BTKi are mutations in BTK or phospholipase Cγ2 (PLCG2). Some differences in the mechanisms of resistance to covalent BTKi have been identified despite their similar mechanism of action. Moreover, novel mutations resulting in resistance to non-covalent BTKi have been recently suggested. This article summarizes the clinical efficacy and the latest data regarding resistance to all of the registered BTKi. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
19 pages, 1726 KiB  
Article
Organic Phosphorus Fractions in Relation to Soil Aggregate Fractions of Black Soil
by Stanko Milić, Jordana Ninkov, Jovica Vasin, Tijana Zeremski, Snežana Jakšić, Milorad Živanov, Srđan Šeremešić and Dubravka Milić
Agronomy 2024, 14(5), 1022; https://doi.org/10.3390/agronomy14051022 (registering DOI) - 11 May 2024
Abstract
Knowledge of long-term phosphorus behavior is essential to improve soil structure, nutrient supply potential, and the sustainability of cropping systems. A 45-year long-term experimental trial was used to observe organic phosphorus fractionation and its effects on soil aggregation and nutrient distribution at three [...] Read more.
Knowledge of long-term phosphorus behavior is essential to improve soil structure, nutrient supply potential, and the sustainability of cropping systems. A 45-year long-term experimental trial was used to observe organic phosphorus fractionation and its effects on soil aggregation and nutrient distribution at three depths (0–20, 20–40, and 40–60 cm) in Vojvodina Province, Serbia, under maize monoculture and maize/barley rotation. Five fertilizing systems were studied, including Control, NPK, NPK + maize remains, NPK + manure, and NPK + manure in rotation. Soil aggregates were fractionated into four size categories (>2000, 2000–250, 250–53, and <53 μm) using a wet sieving method. The samples were analyzed for main indicators, including different forms of phosphorus, total and available (PT and PA), as well as its organic forms (Labile Po, Biomass Po, Mod. Labile Po, Fulvic acid Po, Humic acid Po, and Resistant Po), and other fertility parameters. Significant differences in total and available phosphorus as well as all observed organic phosphorus fractions were evident between treatments with and without organic amendments, particularly in the 0–20 and 20–40 cm soil layers. Moderately labile P forms were dominant across all treatments, while labile forms constituted a smaller proportion. The most notable differences between treatments were observed in the labile and moderately labile forms, as well as in the resistant form of organic phosphorus. Manure application led to increased nutrient content in macroaggregates (>250 μm) compared to microaggregates. Microaggregates (<250 μm) were predominant across all depths, while stable structural aggregates did not show a significant increase after manure application. PCA highlighted significant correlations between soil characteristics, including total and available P, total organic carbon, clay content, and enzyme activity, across different aggregate sizes and organic P fractions. Overall, long-term mineral fertilization combined with organic amendment application induced variations in phosphorus fractions and the content of carbon, nitrogen, and phosphorus associated with aggregates in the first two soil layers, except for aggregate size classes. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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12 pages, 2688 KiB  
Article
A Naked-Eye Colorimetric Ratio Method for the Selective and Sensitive Detection of L-Cys Based on a Silver Nanoflakes–Chromium (III) Ion System
by Xi Zhang, Yunyi Zhang, Yuwei Gu, Junyu Zhou, Ming Li and Jian Qi
Chemosensors 2024, 12(5), 80; https://doi.org/10.3390/chemosensors12050080 (registering DOI) - 11 May 2024
Abstract
As a necessary sulfhydryl amino acid, L-cysteine (L-Cys) maintains many physiological functions in the biological system. However, abnormal L-Cys levels can cause a variety of diseases. In our work, a highly sensitive and selective assay has been developed for sensing L-Cys using the [...] Read more.
As a necessary sulfhydryl amino acid, L-cysteine (L-Cys) maintains many physiological functions in the biological system. However, abnormal L-Cys levels can cause a variety of diseases. In our work, a highly sensitive and selective assay has been developed for sensing L-Cys using the morphological transformation of silver-based materials induced by Cr3+. In this sensing system, Cr3+ could etch the silver nanoflakes into silver nanoparticles, accompanied by a change in absorbance, which decreases at 395 nm, creates a new peak at 538 nm, and keeps increasing the absorbance with the addition of Cr3+ concentration. Meanwhile, under the naked eye, the solution color changes from bright yellow to dark purple. Because of the strong affinity between L-Cys and Cr3+, L-Cys could inhibit the induction of Cr3+ on silver-based materials, thereby preventing changes in the configuration, absorption spectrum, and color of silver-based materials. Taking advantage of this point, we can quantitatively detect the concentration of L-Cys. A linear relationship between the absorbance ratio (A538 nm/A395 nm) and L-Cys concentration was found in the range of 0.1–0.9 μM, and the detection limit was 41.2 nM. The strategy was applied to measure L-Cys spiked in beer and urine samples, with recovery from 93.80 to 104.03% and 93.33% to 107.14% and RSD from 0.89 to 2.40% and 1.80% to 6.78%, respectively. This detection strategy demonstrates excellent selectivity and sensitivity, which makes it a practical and effective method for the detection of L-Cys in real samples. Full article
19 pages, 4584 KiB  
Article
Mobile Robot + IoT: Project of Sustainable Technology for Sanitizing Broiler Poultry Litter
by Alan Kunz Cechinel, Carlos Eduardo Soares, Sergio Genilson Pfleger, Leonardo Luiz Gambalonga Alves De Oliveira, Ederson Américo de Andrade, Claudia Damo Bertoli, Carlos Roberto De Rolt, Edson Roberto De Pieri, Patricia Della Méa Plentz and Juha Röning
Sensors 2024, 24(10), 3049; https://doi.org/10.3390/s24103049 (registering DOI) - 11 May 2024
Abstract
The traditional aviary decontamination process involves farmers applying pesticides to the aviary’s ground. These agricultural defenses are easily dispersed in the air, making the farmers susceptible to chronic diseases related to recurrent exposure. Industry 5.0 raises new pillars of research and innovation in [...] Read more.
The traditional aviary decontamination process involves farmers applying pesticides to the aviary’s ground. These agricultural defenses are easily dispersed in the air, making the farmers susceptible to chronic diseases related to recurrent exposure. Industry 5.0 raises new pillars of research and innovation in transitioning to more sustainable, human-centric, and resilient companies. Based on these concepts, this paper presents a new aviary decontamination process that uses IoT and a robotic platform coupled with ozonizer (O3) and ultraviolet light (UVL). These clean technologies can successfully decontaminate poultry farms against pathogenic microorganisms, insects, and mites. Also, they can degrade toxic compounds used to control living organisms. This new decontamination process uses physicochemical information from the poultry litter through sensors installed in the environment, which allows accurate and safe disinfection. Different experimental tests were conducted to construct the system. First, tests related to measuring soil moisture, temperature, and pH were carried out, establishing the range of use and the confidence interval of the measurements. The robot’s navigation uses a back-and-forth motion that parallels the aviary’s longest side because it reduces the number of turns, reducing energy consumption. This task becomes more accessible because of the aviaries’ standardized geometry. Furthermore, the prototype was tested in a real aviary to confirm the innovation, safety, and effectiveness of the proposal. Tests have shown that the UV + ozone combination is sufficient to disinfect this environment. Full article
29 pages, 40634 KiB  
Article
Detection of Crabs and Lobsters Using a Benchmark Single-Stage Detector and Novel Fisheries Dataset
by Muhammad Iftikhar, Marie Neal, Natalie Hold, Sebastian Gregory Dal Toé and Bernard Tiddeman
Computers 2024, 13(5), 119; https://doi.org/10.3390/computers13050119 (registering DOI) - 11 May 2024
Abstract
Crabs and lobsters are valuable crustaceans that contribute enormously to the seafood needs of the growing human population. This paper presents a comprehensive analysis of single- and multi-stage object detectors for the detection of crabs and lobsters using images captured onboard fishing boats. [...] Read more.
Crabs and lobsters are valuable crustaceans that contribute enormously to the seafood needs of the growing human population. This paper presents a comprehensive analysis of single- and multi-stage object detectors for the detection of crabs and lobsters using images captured onboard fishing boats. We investigate the speed and accuracy of multiple object detection techniques using a novel dataset, multiple backbone networks, various input sizes, and fine-tuned parameters. We extend our work to train lightweight models to accommodate the fishing boats equipped with low-power hardware systems. Firstly, we train Faster R-CNN, SSD, and YOLO with different backbones and tuning parameters. The models trained with higher input sizes resulted in lower frames per second (FPS) and vice versa. The base models were highly accurate but were compromised in computational and run-time costs. The lightweight models were adaptable to low-power hardware compared to the base models. Secondly, we improved the performance of YOLO (v3, v4, and tiny versions) using custom anchors generated by the k-means clustering approach using our novel dataset. The YOLO (v4 and it’s tiny version) achieved mean average precision (mAP) of 99.2% and 95.2%, respectively. The YOLOv4-tiny trained on the custom anchor-based dataset is capable of precisely detecting crabs and lobsters onboard fishing boats at 64 frames per second (FPS) on an NVidia GeForce RTX 3070 GPU. The Results obtained identified the strengths and weaknesses of each method towards a trade-off between speed and accuracy for detecting objects in input images. Full article
(This article belongs to the Special Issue Selected Papers from Computer Graphics & Visual Computing (CGVC 2023))
17 pages, 1525 KiB  
Article
A Construction Method for a Dynamic Weighted Protein Network Using Multi-Level Embedding
by Peng Li, Shufang Guo, Chenghao Zhang, Mosharaf Md Parvej and Jing Zhang
Appl. Sci. 2024, 14(10), 4090; https://doi.org/10.3390/app14104090 (registering DOI) - 11 May 2024
Abstract
The rapid development of high-throughput technology has generated a large amount of protein–protein interaction (PPI) data, which provide a large amount of data support for constructing dynamic protein–protein interaction networks (PPINs). Constructing dynamic PPINs and applying them to recognize protein complexes has become [...] Read more.
The rapid development of high-throughput technology has generated a large amount of protein–protein interaction (PPI) data, which provide a large amount of data support for constructing dynamic protein–protein interaction networks (PPINs). Constructing dynamic PPINs and applying them to recognize protein complexes has become a hot research topic. Most existing methods for complex recognition cannot fully mine the information of PPINs. To address this problem, we propose a construction method of dynamic weighted protein network by multi-level embedding (DWPNMLE). It can reflect the protein network’s dynamics and the protein network’s higher-order proximity. Firstly, the protein active period is calculated to divide the protein subnetworks at different time points. Then, the connection probability is used for the proteins possessing the same time points to judge whether there is an interaction relationship between them. Then, the corresponding protein subnetworks (multiple adjacency matrices) are constructed. Secondly, the multiple feature matrices are constructed using one-hot coding with the gene ontology (GO) information. Next, the first embedding is performed using variational graph auto-encoders (VGAEs) to aggregate features efficiently, followed by the second embedding using deep attributed network embedding (DANE) to strengthen the node representations learned in the first embedding and to maintain the first-order and higher-order proximity of the original network; finally, we compute the cosine similarity to obtain the final dynamic weighted PPIN. To evaluate the effectiveness of DWPNMLE, we apply four classical protein-complex-recognition algorithms on the DWPNMLE and compare them with two other dynamic protein network construction methods. The experimental results demonstrate that DWPNMLE significantly enhances the accuracy of complex recognition with high robustness, and the algorithms’ efficiency is also within a reasonable range. Full article
14 pages, 2793 KiB  
Article
Comparison of the Analgesic Effect of Pericapsular Nerve Group Block and Lumbar Erector Spinae Plane Block in Elective Hip Surgery
by Onur Küçük, Fatih Sağ, Ali Eyrice, Selman Karadayı, Ali Alagöz and Alkin Çolak
Medicina 2024, 60(5), 799; https://doi.org/10.3390/medicina60050799 (registering DOI) - 11 May 2024
Abstract
Background and Objectives: The aim of this study was to compare the effectiveness of pericapsular nerve group (PENG) and lumbar erector spinae plane (L-ESP) blocks, both administered with a high volume (40 mL) of local anesthetic (LA), for multimodal postoperative analgesia in [...] Read more.
Background and Objectives: The aim of this study was to compare the effectiveness of pericapsular nerve group (PENG) and lumbar erector spinae plane (L-ESP) blocks, both administered with a high volume (40 mL) of local anesthetic (LA), for multimodal postoperative analgesia in patients undergoing hip surgery. Materials and Methods: This was a prospective, double-blind, randomized study that included 75 adult patients who were divided into three equal groups: control, PENG, and L-ESP. The study compared pain intensity, morphine consumption, time to first morphine request, and postoperative satisfaction between the control group, which received standard multimodal analgesia, and the block groups, which received PENG or L-ESP block in addition to multimodal analgesia. The numerical rating scale (NRS) was used to measure pain intensity. Results: The results showed that the block groups had lower pain intensity scores and morphine consumption, a longer time to the first morphine request, and higher postoperative satisfaction compared to the control group. The median maximum NRS score during the first 12 h was four in the control group, two in the PENG group, and three in the L-ESP group. The control group (21.52 ± 9.63 mg) consumed more morphine than the two block groups (PENG, 11.20 ± 7.55 mg; L-ESP, 12.88 ± 8.87 mg) and requested morphine 6.8 h earlier and 5 h earlier than the PENG and L-ESP groups, respectively. The control group (median 3) had the lowest Likert satisfaction scores, while the PENG group (median 4) had the lowest NRS scores (L-ESP, median 4). Conclusions: The application of PENG or L-ESP blocks with high-volume LA in patients undergoing hip surgery reduces the need for postoperative analgesia and improves the quality of multimodal analgesia. Full article
(This article belongs to the Section Intensive Care/ Anesthesiology)
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13 pages, 9814 KiB  
Article
Aluminium-Silicon Lightweight Thermal Management Alloys with Controlled Thermal Expansion
by Peter Lewis, Andrew Tarrant, Andreas Frehn, Fritz Grensing, James Nicholson, Nick Farrah and Martyn Acreman
Crystals 2024, 14(5), 455; https://doi.org/10.3390/cryst14050455 (registering DOI) - 11 May 2024
Abstract
With the ever-growing emphasis on global decarbonization and rapid increases in the power densities of electronics equipment in recent years, new methods and lightweight materials have been developed to manage heat load as well as interfacial stresses associated with coefficient of thermal expansion [...] Read more.
With the ever-growing emphasis on global decarbonization and rapid increases in the power densities of electronics equipment in recent years, new methods and lightweight materials have been developed to manage heat load as well as interfacial stresses associated with coefficient of thermal expansion (CTE) mismatches between components. The Al–Si system provides an attractive combination of CTE performance and high thermal conductivity whilst being a very lightweight option. Such materials are of interest to industries where thermal management is a key design criterion, such as the aerospace, automotive, consumer electronics, defense, EV, and space sectors. This paper will describe the development and manufacture of a family of high-performance hypereutectic Al–Si alloys (AyontEX™) by a powder metallurgy method. These alloys are of particular interest for structural heat sink applications that require high reliability under thermal cycling (CTE of 17 μm/(m·°C)), as well as reflective optics and instrument assemblies that require good thermal and mechanical stability (CTE of 13 μm/(m·°C)). Critical performance relationships are presented, coupled with the microstructural, physical, and mechanical properties of these Al–Si alloys. Full article
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11 pages, 994 KiB  
Article
Zinc Oxide Nanostructure Deposition into Sub-5 nm Vertical Mesopores in Silica Hard Templates by Atomic Layer Deposition
by Tauqir Nasir, Yisong Han, Chris Blackman, Richard Beanland and Andrew L. Hector
Materials 2024, 17(10), 2272; https://doi.org/10.3390/ma17102272 (registering DOI) - 11 May 2024
Abstract
Nanostructures synthesised by hard-templating assisted methods are advantageous as they retain the size and morphology of the host templates which are vital characteristics for their intended applications. A number of techniques have been employed to deposit materials inside porous templates, such as electrodeposition, [...] Read more.
Nanostructures synthesised by hard-templating assisted methods are advantageous as they retain the size and morphology of the host templates which are vital characteristics for their intended applications. A number of techniques have been employed to deposit materials inside porous templates, such as electrodeposition, vapour deposition, lithography, melt and solution filling, but most of these efforts have been applied with pore sizes higher in the mesoporous regime or even larger. Here, we explore atomic layer deposition (ALD) as a method for nanostructure deposition into mesoporous hard templates consisting of mesoporous silica films with sub-5 nm pore diameters. The zinc oxide deposited into the films was characterised by small-angle X-ray scattering, X-ray diffraction and energy-dispersive X-ray analysis. Full article
(This article belongs to the Special Issue Atomic Layer Deposition: From Thin Films to Nanostructured Materials)
19 pages, 8994 KiB  
Article
The Impact of Plasma Surface Treatments on the Mechanical Properties and Magnetic Performance of FDM-Printed NdFeB/PA12 Magnets
by Ana Damnjanović, Gregor Primc, Rok Zaplotnik, Miran Mozetič and Nataša Kovačević
Materials 2024, 17(10), 2275; https://doi.org/10.3390/ma17102275 (registering DOI) - 11 May 2024
Abstract
This study presents a novel approach for improving the interfacial adhesion between Nd–Fe–B spherical magnetic powders and polyamide 12 (PA12) in polymer-bonded magnets using plasma treatments. By applying radio frequency plasma to the magnetic powder and low-pressure microwave plasma to PA12, we achieved [...] Read more.
This study presents a novel approach for improving the interfacial adhesion between Nd–Fe–B spherical magnetic powders and polyamide 12 (PA12) in polymer-bonded magnets using plasma treatments. By applying radio frequency plasma to the magnetic powder and low-pressure microwave plasma to PA12, we achieved a notable enhancement in the mechanical and environmental stability of fused deposition modeling (FDM)-printed Nd-Fe-B/PA12 magnets. The densities of the FDM-printed materials ranged from 92% to 94% of their theoretical values, with magnetic remanence (Br) ranging from 85% to 89% of the theoretical values across all batches. The dual plasma-treated batch demonstrated an optimal mechanical profile with an elastic modulus of 578 MPa and the highest ductility at 21%, along with a tensile strength range of 6 to 7 MPa across all batches. Flexural testing indicated that this batch also achieved the highest flexural strength of 15 MPa with a strain of 5%. Environmental stability assessments confirmed that applied plasma treatments did not compromise resistance to corrosion, evidenced by negligible flux loss in both hygrothermal and bulk corrosion tests. These results highlight plasma treatment’s potential to enhance mechanical strength, magnetic performance, and environmental stability. Full article
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14 pages, 6946 KiB  
Article
Fiber-Reinforced Coal Gangue-Based Alumina Aerogel Composites with Highly Thermal Stability by Ambient Pressure Drying
by Kai Bo, Hongwei Liu, Yanlan Zhang and Yongzhen Wang
Sustainability 2024, 16(10), 4032; https://doi.org/10.3390/su16104032 (registering DOI) - 11 May 2024
Abstract
An aluminum silicate fiber/alumina aerogel (ASF/AA) composite was prepared via the sol-gel method and atmospheric drying (APD) method using coal gangue (CG) solid waste from Xingxian county, Shanxi Province, as the aluminum source. Utilizing N2 adsorption, scanning electron microscopy, Fourier transform infrared [...] Read more.
An aluminum silicate fiber/alumina aerogel (ASF/AA) composite was prepared via the sol-gel method and atmospheric drying (APD) method using coal gangue (CG) solid waste from Xingxian county, Shanxi Province, as the aluminum source. Utilizing N2 adsorption, scanning electron microscopy, Fourier transform infrared spectroscopy, X-ray diffraction, and thermal conductivity meters, researchers examined the microstructure, composition, pore structure, and thermal insulation performance of ASF/AA composites. The thermal conductivity mechanism of the composite was analyzed. The experimental results show that most of the aluminum in CG is used. More importantly, in the process of aerogel synthesis, the atmospheric pressure drying method is used to obtain similar properties to supercritical drying. The composite material exhibits a low thermal conductivity of 0.047 W/(m·K), a high specific surface area of 416 m2/g, and a low density of 0.26 g/cm3 at room temperature. After heating at 1200 °C for 2 h, the thermal conductivity was as low as 0.071 W/(m·K). This strategy can not only effectively achieve a reduction in the harmfulness of solid waste coal gangue, but also alleviate the shortage of related energy and resources in our country. Full article
(This article belongs to the Topic Advances in Sustainable Materials and Products)
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15 pages, 1340 KiB  
Article
Chemical Composition of Essential Oil from Citrus reticulata Blanco cv. Chachiensis (Chachi) and Its Anti-Mosquito Activity against Pyrethroid-Resistant Aedes albopictus
by Jifan Cao, Wende Zheng, Baizhong Chen, Zhenping Yan, Xiaowen Tang, Jiahao Li, Zhen Zhang, Song Ang, Chen Li, Rihui Wu, Panpan Wu and Wen-Hua Chen
Insects 2024, 15(5), 345; https://doi.org/10.3390/insects15050345 (registering DOI) - 11 May 2024
Abstract
The overuse of synthetic insecticides has led to various negative consequences, including insecticide resistance, environmental pollution, and harm to public health. This may be ameliorated by using insecticides derived from botanical sources. The primary objective of this study was to evaluate the anti-mosquito [...] Read more.
The overuse of synthetic insecticides has led to various negative consequences, including insecticide resistance, environmental pollution, and harm to public health. This may be ameliorated by using insecticides derived from botanical sources. The primary objective of this study was to evaluate the anti-mosquito activity of the essential oil (EO) of Citrus reticulata Blanco cv. Chachiensis (Chachi) (referred to as CRB) at immature, semi-mature, and mature stages. The chemical compositions of the CRB EO were analyzed using GC-MS. The main components were identified to be D-limonene and γ-terpinene. The contents of D-limonene at the immature, semi-mature, and mature stages were 62.35%, 76.72%, and 73.15%, respectively; the corresponding contents of γ-terpinene were 14.26%, 11.04%, and 11.27%, respectively. In addition, the corresponding contents of a characteristic component, methyl 2-aminobenzoate, were 4.95%, 1.93%, and 2.15%, respectively. CRB EO exhibited significant larvicidal activity against Aedes albopictus (Ae. albopictus, Diptera: Culicidae), with the 50% lethal doses being 65.32, 61.47, and 65.91 mg/L for immature, semi-mature, and mature CRB EO, respectively. CRB EO was able to inhibit acetylcholinesterase and three detoxification enzymes, significantly reduce the diversity of internal microbiota in mosquitoes, and decrease the relative abundance of core species within the microbiota. The present results may provide novel insights into the utilization of plant-derived essential oils in anti-mosquitoes. Full article
(This article belongs to the Section Insect Pest and Vector Management)
18 pages, 4725 KiB  
Article
Do Water Transfer Projects Promote Water Use Efficiency? Case Study of South-to-North Water Transfer Project in Yellow River Basin of China
by Li Ma and Qi Wang
Water 2024, 16(10), 1367; https://doi.org/10.3390/w16101367 (registering DOI) - 11 May 2024
Abstract
With a huge capital and labor input influx, inter-basin water transfer (IBWT) projects have been shown to effectively mitigate water stress and ensure the water demand for social and economic development in the receiving area. Whether they have promoted the improvement of regional [...] Read more.
With a huge capital and labor input influx, inter-basin water transfer (IBWT) projects have been shown to effectively mitigate water stress and ensure the water demand for social and economic development in the receiving area. Whether they have promoted the improvement of regional water use efficiency (WUE) is crucial for sustainable management of regional water resources. Targeting the South-to-North Water Transfer Project (SNWTP), the largest and most ambitious inter-basin water transfer project in China, this study establishes quantitatively econometric models to analyze the impact of different water diversion projects, specifically the eastern route of the SNWTP (ER-SNWTP), middle route of the SNWTP (MR-SNWTP), and diversion from the main stream of the Yellow River (DYR), on the regional water consumption per unit of GDP; regional water stress, water use structure, economic structure, and urbanization level are used as control variables in different types of cities in the Yellow River Basin, and some intriguing results are found. While the overall water transfer project demonstrates a positive impact on water use efficiency, the effects of the three water transfer measures vary significantly. The ER-SNWTP does not exhibit a notable positive effect on regional water use efficiency, whereas the MR-SNWTP demonstrates a significant positive impact. Interestingly, the DYR has a notable negative influence on water use efficiency in developed cities. The water use structure, shaped by the pricing, scale, and policies of different projects, emerges as a pivotal factor in explaining these differences. Finally, this paper suggests that the impact of water transfer projects on the improvement of regional water use efficiency be viewed from a more comprehensive and developmental perspective. Full article
(This article belongs to the Special Issue Socio-Economics of Water Resources Management)

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