The 2023 MDPI Annual Report has
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27 pages, 5789 KiB  
Article
Prediction of Individual Gas Yields of Supercritical Water Gasification of Lignocellulosic Biomass by Machine Learning Models
by Kapil Khandelwal and Ajay K. Dalai
Molecules 2024, 29(10), 2337; https://doi.org/10.3390/molecules29102337 (registering DOI) - 16 May 2024
Abstract
Supercritical water gasification (SCWG) of lignocellulosic biomass is a promising pathway for the production of hydrogen. However, SCWG is a complex thermochemical process, the modeling of which is challenging via conventional methodologies. Therefore, eight machine learning models (linear regression (LR), Gaussian process regression [...] Read more.
Supercritical water gasification (SCWG) of lignocellulosic biomass is a promising pathway for the production of hydrogen. However, SCWG is a complex thermochemical process, the modeling of which is challenging via conventional methodologies. Therefore, eight machine learning models (linear regression (LR), Gaussian process regression (GPR), artificial neural network (ANN), support vector machine (SVM), decision tree (DT), random forest (RF), extreme gradient boosting (XGB), and categorical boosting regressor (CatBoost)) with particle swarm optimization (PSO) and a genetic algorithm (GA) optimizer were developed and evaluated for prediction of H2, CO, CO2, and CH4 gas yields from SCWG of lignocellulosic biomass. A total of 12 input features of SCWG process conditions (temperature, time, concentration, pressure) and biomass properties (C, H, N, S, VM, moisture, ash, real feed) were utilized for the prediction of gas yields using 166 data points. Among machine learning models, boosting ensemble tree models such as XGB and CatBoost demonstrated the highest power for the prediction of gas yields. PSO-optimized XGB was the best performing model for H2 yield with a test R2 of 0.84 and PSO-optimized CatBoost was best for prediction of yields of CH4, CO, and CO2, with test R2 values of 0.83, 0.94, and 0.92, respectively. The effectiveness of the PSO optimizer in improving the prediction ability of the unoptimized machine learning model was higher compared to the GA optimizer for all gas yields. Feature analysis using Shapley additive explanation (SHAP) based on best performing models showed that (21.93%) temperature, (24.85%) C, (16.93%) ash, and (29.73%) C were the most dominant features for the prediction of H2, CH4, CO, and CO2 gas yields, respectively. Even though temperature was the most dominant feature, the cumulative feature importance of biomass characteristics variables (C, H, N, S, VM, moisture, ash, real feed) as a group was higher than that of the SCWG process condition variables (temperature, time, concentration, pressure) for the prediction of all gas yields. SHAP two-way analysis confirmed the strong interactive behavior of input features on the prediction of gas yields. Full article
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13 pages, 1475 KiB  
Article
Synergistic Effect of Postbiotic Yeast ABB C22® on Gut Inflammation, Barrier Function, and Protection from Rotavirus Infection in In Vitro Models
by Lydia Carrera Marcolin, Jordi Cuñé Castellana, Laia Martí Melero, Carlos de Lecea and Maria Tintoré Gazulla
Appl. Microbiol. 2024, 4(2), 811-823; https://doi.org/10.3390/applmicrobiol4020056 (registering DOI) - 16 May 2024
Abstract
Diarrhoea is a serious cause of mortality worldwide that can lead to dehydration, gut barrier function impairment, nutrient malabsorption, and alterations of the gut microbiota (dysbiosis). The current solutions for its management, such as oral rehydration salts (ORS), inhibitors of gut motility, antibiotics, [...] Read more.
Diarrhoea is a serious cause of mortality worldwide that can lead to dehydration, gut barrier function impairment, nutrient malabsorption, and alterations of the gut microbiota (dysbiosis). The current solutions for its management, such as oral rehydration salts (ORS), inhibitors of gut motility, antibiotics, and living probiotics, only partially counteract the mechanisms of the disease and do not provide a full coverage of the problem. The potential risks of the use of living probiotic strains, particularly in immunocompromised patients, can be eliminated with the use of tyndallized (heat-killed) postbiotic bacteria and yeast. ABB C22® is a postbiotic combination of three tyndallized yeasts, namely Saccharomyces boulardii, Saccharomyces cerevisiae, and Kluyveromyces marxianus. To assess the action of the postbiotic combination on diarrhoea, immune and gut epithelial cell signalling assays, the gut barrier formation assay, and the rotavirus gene expression assay were performed. ABB C22® showed a strong anti-inflammatory effect, an induction of the build-up of the gut epithelium, and a degree of protection against rotavirus infection. These experimental studies support the use of the postbiotic ABB C22® as a solution for the management of diarrhoea and gastrointestinal conditions, alone or in combination with existing but incomplete treatments. Full article
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17 pages, 32510 KiB  
Article
First-Principles and Experimental Study of Ge, V, Ta-Doped AgNi Electrical Contact Materials
by Jingqin Wang, Yixuan Zhang, Menghan Wang, Jing Chen and Guanglin Huang
Coatings 2024, 14(5), 629; https://doi.org/10.3390/coatings14050629 (registering DOI) - 16 May 2024
Abstract
To explore the stability, electrical, and mechanical characteristics of undoped AgNi alongside AgNi doped with elemental Ge, V, and Ta, we performed calculations on their electronic structures using density functional theory from first-principles. We also prepared AgNi(17) and AgNi-x(Ge, V, Ta) electrical contact [...] Read more.
To explore the stability, electrical, and mechanical characteristics of undoped AgNi alongside AgNi doped with elemental Ge, V, and Ta, we performed calculations on their electronic structures using density functional theory from first-principles. We also prepared AgNi(17) and AgNi-x(Ge, V, Ta) electrical contact materials using the powder metallurgy technique, and they were subsequently assessed experimentally. The electrical properties of these materials were evaluated under a 24 V/15 A DC-resistive load using the JF04D contact material testing system. A three-dimensional morphology scanner was employed to examine the contact surface and investigate the erosion patterns of the materials. Our findings indicate that doping with metal elements significantly enhanced the mechanical properties of electrical contacts, including conductivity and hardness, and optimizes arc parameters while improving resistance to arc erosion. Notably, AgNi-Ge demonstrated superior conductivity and arc erosion resistance, showing significant improvements over the undoped AgNi contacts. This research provides a theoretical foundation for selecting doping elements aimed at enhancing the performance of AgNi electrical contact materials. Full article
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14 pages, 3597 KiB  
Article
Dissemination of Ceftriaxone-Resistant Salmonella Enteritidis Harboring Plasmids Encoding blaCTX-M-55 or blaCTX-M-14 Gene in China
by Siyuan Yang, Jianzhong Fan, Lifei Yu, Jintao He, Linghong Zhang, Yunsong Yu and Xiaoting Hua
Antibiotics 2024, 13(5), 456; https://doi.org/10.3390/antibiotics13050456 (registering DOI) - 16 May 2024
Abstract
Salmonella Enteritidis was the primary foodborne pathogen responsible for acute gastroenteritis. The growing ceftriaxone resistance poses a significant threat to public health. Infection with S. Enteritidis has emerged as a major public health concern, particularly in developing countries. However, research on ceftriaxone-resistant S. [...] Read more.
Salmonella Enteritidis was the primary foodborne pathogen responsible for acute gastroenteritis. The growing ceftriaxone resistance poses a significant threat to public health. Infection with S. Enteritidis has emerged as a major public health concern, particularly in developing countries. However, research on ceftriaxone-resistant S. Enteritidis (CRO-RSE) remains limited, particularly concerning its resistance mechanism, plasmid structure, and transmission characteristics. This study aims to address these gaps comprehensively. We collected 235 S. Enteritidis isolates from Hangzhou First People’s Hospital between 2010 and 2020. Among these, 8.51% (20/235) exhibited resistance to ceftriaxone. Whole-genome analysis revealed that 20 CRO-RSE isolates harbored blaCTX-M-55 or blaCTX-M-14 on the plasmid. Moreover, the dissemination of the blaCTX-M-type gene was associated with IS26 and ISEcp1. Plasmid fusion entailing the integration of the p1 plasmid with antibiotic resistance genes and the p2 (pSEV) virulence plasmid was observed in certain CRO-RSE. Additionally, the structural analysis of the plasmids unveiled two types carrying the blaCTX-M-type gene: type A with multiple replicons and type B with IncI1 (Alpha) replicon. Type B plasmids exhibited superior adaptability and stability compared to type A plasmids within Enterobacteriaceae. Interestingly, although the type B (S808-p1) plasmid displayed the potential to spread to Acinetobacter baumannii, it failed to maintain stability in this species. Full article
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11 pages, 1184 KiB  
Article
Factors Influencing Non-Surgical Root Canal Treatment Outcomes in Mandibular Second Molars: A Retrospective Cone-Beam Computed Tomography Analysis
by Da-Min Park, Woo-Hyun Seok and Ji-Young Yoon
J. Clin. Med. 2024, 13(10), 2931; https://doi.org/10.3390/jcm13102931 (registering DOI) - 16 May 2024
Abstract
Background/Objectives: This study aimed to investigate the influence of the root canal morphology and various treatment variables on the outcomes of root canal treatments (RCTs) in mandibular second molars, assessed through cone-beam computed tomography (CBCT) imaging. Methods: A total of 150 CBCT images [...] Read more.
Background/Objectives: This study aimed to investigate the influence of the root canal morphology and various treatment variables on the outcomes of root canal treatments (RCTs) in mandibular second molars, assessed through cone-beam computed tomography (CBCT) imaging. Methods: A total of 150 CBCT images were examined, comprising 100 cases of persistent endodontic infections and 50 of previously treated root canals with normal apices in the mandibular second molars. CBCT was utilized to evaluate the root canal configuration, the radiographic quality of coronal restorations and treated canal systems, and the presence of periapical lesions. Statistical analyses were performed to explore the correlations between these factors. Results: The presence of a C-shaped root canal configuration did not demonstrate a significant correlation with periapical lesions (p = 0.05). Factors influencing endodontic treatment outcomes included missing canals (p = 0.018), underfilling or overfilling (p = 0.045), and inadequate coronal restoration (p = 0.006). Missing a canal was identified as the variable most significantly associated with periapical lesions (OR = 3.103). Inhomogeneous root canal obturation was more commonly observed in C-shaped root canals (p < 0.001). Conclusions: Regardless of the root canal morphology of mandibular second molars, successful RCT depends on thorough disinfection to eliminate any untreated canals, precise three-dimensional filling of the canals at the correct working length, and a securely sealed coronal restoration to prevent leakage. Full article
(This article belongs to the Special Issue Surgical and Non-surgical Endodontics in 2024 and Beyond)
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14 pages, 10257 KiB  
Article
The Preparation of Crumpled Graphene Oxide Balls and Research in Tribological Properties
by Lili Zhang, Zhengrui Zhang, Xi’an Gao and Hao Liao
Materials 2024, 17(10), 2383; https://doi.org/10.3390/ma17102383 (registering DOI) - 16 May 2024
Abstract
In this study, crumpled graphene oxide balls (CGBs) were prepared via capillary compression using a rapidly evaporating aerosol droplet method. The CGBs were observed using scanning electron microscopy (SEM), high-resolution transmission electron microscopy (HRTEM), and Raman spectroscopy. The size distributions of crumpled particles [...] Read more.
In this study, crumpled graphene oxide balls (CGBs) were prepared via capillary compression using a rapidly evaporating aerosol droplet method. The CGBs were observed using scanning electron microscopy (SEM), high-resolution transmission electron microscopy (HRTEM), and Raman spectroscopy. The size distributions of crumpled particles were obtained using a laser nanometer particle size analyzer (DLS). The dispersibility of the water and the ionic liquid (IL) was tested by ultrasonic dispersion. The tribological properties of water or ionic liquids containing crumpled graphene oxide ball additives (W/IL-CGB) were tested by a reciprocating friction tester and compared with water/ionic liquids with graphene oxide. The morphology of the wear scar was observed by a three-dimensional optical microscope and its lubrication mechanism was analyzed. The results show that the CGBs were successfully prepared by rapid evaporation of aerosol droplets, and the obtained CGBs were crumpled paper spheres. The CGBs had good water dispersion and ionic liquid dispersion, and IL-CGB has excellent anti-friction and anti-wear effects on steel–steel friction pairs. During the friction process, the CGB was adsorbed at the interface of the steel–steel friction pair to form a protective layer, which avoids the direct contact of the friction pair, thereby reducing friction and wear. Full article
(This article belongs to the Special Issue Advanced Nanomaterials: Synthesis, Characterization and Applications)
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11 pages, 622 KiB  
Article
Research of Global Tilt and Functional Independence: Insights into Spinal Health of Older Women
by Yu-Chieh Chiu, Ping-Chiao Tsai, Ssu-Hsien Lee, Wen-Tien Wu, Tzai-Chiu Yu, Ru-Ping Lee, Ing-Ho Chen, Jen-Hung Wang and Kuang-Ting Yeh
Bioengineering 2024, 11(5), 493; https://doi.org/10.3390/bioengineering11050493 (registering DOI) - 16 May 2024
Abstract
Spinal alignment intricately influences functional independence, particularly in older women with osteopenia experiencing mild neck and back pain. This study elucidates the interplay between spinal alignment, bone mineral density (BMD), and muscle strength in elderly women presenting with mild neck and back pain. [...] Read more.
Spinal alignment intricately influences functional independence, particularly in older women with osteopenia experiencing mild neck and back pain. This study elucidates the interplay between spinal alignment, bone mineral density (BMD), and muscle strength in elderly women presenting with mild neck and back pain. Focusing on a cohort of 189 older women, we examined the associations among global tilt (GT), coronal and sagittal alignment, BMD, grip strength, and functional independence as gauged by the Barthel index. Our findings indicate significant associations between functional capacity and grip strength, bone density, GT, and pelvic tilt (PT). Elderly women with a Barthel Index above 80 demonstrated higher grip strength and better bone quality, reflected by less negative average T scores. These individuals also exhibited lower values of GT and PT, suggesting a better sagittal alignment compared to those with a Barthel index of 80 or below. The results highlight that deviations in GT and PT are significantly associated with decreased functional independence. These insights emphasize the importance of maintaining optimal spinal alignment and muscle strength to support functional independence in elderly women. This study underscores the potential for targeted interventions that improve postural stability and manage pain effectively in this vulnerable population. Full article
(This article belongs to the Section Biomechanics and Sports Medicine)
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20 pages, 1657 KiB  
Article
Exploring Simplicity Bias in 1D Dynamical Systems
by Kamal Dingle, Mohammad Alaskandarani, Boumediene Hamzi and Ard A. Louis
Entropy 2024, 26(5), 426; https://doi.org/10.3390/e26050426 (registering DOI) - 16 May 2024
Abstract
Arguments inspired by algorithmic information theory predict an inverse relation between the probability and complexity of output patterns in a wide range of input–output maps. This phenomenon is known as simplicity bias. By viewing the parameters of dynamical systems as inputs, and the [...] Read more.
Arguments inspired by algorithmic information theory predict an inverse relation between the probability and complexity of output patterns in a wide range of input–output maps. This phenomenon is known as simplicity bias. By viewing the parameters of dynamical systems as inputs, and the resulting (digitised) trajectories as outputs, we study simplicity bias in the logistic map, Gauss map, sine map, Bernoulli map, and tent map. We find that the logistic map, Gauss map, and sine map all exhibit simplicity bias upon sampling of map initial values and parameter values, but the Bernoulli map and tent map do not. The simplicity bias upper bound on the output pattern probability is used to make a priori predictions regarding the probability of output patterns. In some cases, the predictions are surprisingly accurate, given that almost no details of the underlying dynamical systems are assumed. More generally, we argue that studying probability–complexity relationships may be a useful tool when studying patterns in dynamical systems. Full article
(This article belongs to the Section Complexity)
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46 pages, 6375 KiB  
Review
Chemical and Physical Architecture of Macromolecular Gels for Fracturing Fluid Applications in the Oil and Gas Industry; Current Status, Challenges, and Prospects
by Majad Khan
Gels 2024, 10(5), 338; https://doi.org/10.3390/gels10050338 (registering DOI) - 16 May 2024
Abstract
Hydraulic fracturing is vital in recovering hydrocarbons from oil and gas reservoirs. It involves injecting a fluid under high pressure into reservoir rock. A significant part of fracturing fluids is the addition of polymers that become gels or gel-like under reservoir conditions. Polymers [...] Read more.
Hydraulic fracturing is vital in recovering hydrocarbons from oil and gas reservoirs. It involves injecting a fluid under high pressure into reservoir rock. A significant part of fracturing fluids is the addition of polymers that become gels or gel-like under reservoir conditions. Polymers are employed as viscosifiers and friction reducers to provide proppants in fracturing fluids as a transport medium. There are numerous systems for fracturing fluids based on macromolecules. The employment of natural and man-made linear polymers, and also, to a lesser extent, synthetic hyperbranched polymers, as additives in fracturing fluids in the past one to two decades has shown great promise in enhancing the stability of fracturing fluids under various challenging reservoir conditions. Modern innovations demonstrate the importance of developing chemical structures and properties to improve performance. Key challenges include maintaining viscosity under reservoir conditions and achieving suitable shear-thinning behavior. The physical architecture of macromolecules and novel crosslinking processes are essential in addressing these issues. The effect of macromolecule interactions on reservoir conditions is very critical in regard to efficient fluid qualities and successful fracturing operations. In future, there is the potential for ongoing studies to produce specialized macromolecular solutions for increased efficiency and sustainability in oil and gas applications. Full article
(This article belongs to the Special Issue Polymer Gels for the Oil and Gas Industry)
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39 pages, 20666 KiB  
Article
An Investigation into the Distribution of Fluctuating Wind Pressure and Associated Probabilistic Characteristics of Low-Rise Buildings Impacted by the Gap between the Hillside and the Building
by Min Zhong, Chao Wang, Minghui Lin, Junyu Lu and Xiangjun Wang
Buildings 2024, 14(5), 1435; https://doi.org/10.3390/buildings14051435 (registering DOI) - 16 May 2024
Abstract
In China’s mountainous coastal terrain, storms can badly damage low-rise buildings. At present, it is not clear how the relative position of buildings and mountains affects the surface of low-rise buildings. The study compared these results with the wind pressure distribution without the [...] Read more.
In China’s mountainous coastal terrain, storms can badly damage low-rise buildings. At present, it is not clear how the relative position of buildings and mountains affects the surface of low-rise buildings. The study compared these results with the wind pressure distribution without the surrounding environment. The distribution of wind pressure in different hillside landforms is examined through a wind tunnel experiment, which is also compared with the distribution in an open environment. The study examined the fluctuating coefficient as the distance between the building and the hillside changed, specifically for wind blowing at a 0° angle. The investigation examined the power spectrum and wind pressure probability distribution while considering the proximity of the building to an adjacent hill. The findings indicated that as the distance between the slope and the mountain increases, the fluctuating wind pressure coefficient continues to increase, and the contour lines of the wind pressure distribution are relatively denser compared to where there is a mountain. The maximum value of the fluctuating wind pressure coefficient is 0.22, which appears at the windward roof. The roof’s wind pressure coefficient fluctuated and gradually increased until it reached its peak, unaffected by the surroundings. The wind pressure on the leeward side exhibited Gaussian characteristics in its probability distribution. Full article
(This article belongs to the Section Building Energy, Physics, Environment, and Systems)
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15 pages, 13266 KiB  
Article
A Novel Deep Learning Method for Detecting Strawberry Fruit
by Shuo Shen, Famin Duan, Zhiwei Tian and Chunxiao Han
Appl. Sci. 2024, 14(10), 4213; https://doi.org/10.3390/app14104213 (registering DOI) - 16 May 2024
Abstract
The recognition and localization of strawberries are crucial for automated harvesting and yield prediction. This article proposes a novel RTF-YOLO (RepVgg-Triplet-FocalLoss-YOLO) network model for real-time strawberry detection. First, an efficient convolution module based on structural reparameterization is proposed. This module was integrated into [...] Read more.
The recognition and localization of strawberries are crucial for automated harvesting and yield prediction. This article proposes a novel RTF-YOLO (RepVgg-Triplet-FocalLoss-YOLO) network model for real-time strawberry detection. First, an efficient convolution module based on structural reparameterization is proposed. This module was integrated into the backbone and neck networks to improve the detection speed. Then, the triplet attention mechanism was embedded into the last two detection heads to enhance the network’s feature extraction for strawberries and improve the detection accuracy. Lastly, the focal loss function was utilized to enhance the model’s recognition capability for challenging strawberry targets, which thereby improves the model’s recall rate. The experimental results demonstrated that the RTF-YOLO model achieved a detection speed of 145 FPS (frames per second), a precision of 91.92%, a recall rate of 81.43%, and an mAP (mean average precision) of 90.24% on the test dataset. Relative to the baseline of YOLOv5s, it showed improvements of 19%, 2.3%, 4.2%, and 3.6%, respectively. The RTF-YOLO model performed better than other mainstream models and addressed the problems of false positives and false negatives in strawberry detection caused by variations in illumination and occlusion. Furthermore, it significantly enhanced the speed of detection. The proposed model can offer technical assistance for strawberry yield estimation and automated harvesting. Full article
(This article belongs to the Special Issue Applied Computer Vision in Industry and Agriculture)
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12 pages, 1531 KiB  
Article
Clinicopathologic Analysis and Prognostic Factors for Survival in Patients with Operable Ampullary Carcinoma: A Multi-Institutional Retrospective Experience
by Nebi Serkan Demirci, Eyyup Cavdar, Nuriye Yildirim Ozdemir, Sinemis Yuksel, Yakup Iriagac, Gokmen Umut Erdem, Hatice Odabas, Ilhan Hacibekiroglu, Mustafa Karaagac, Mahmut Ucar, Banu Ozturk and Yakup Bozkaya
Medicina 2024, 60(5), 818; https://doi.org/10.3390/medicina60050818 (registering DOI) - 16 May 2024
Abstract
Background and Objectives: In ampullary cancer, 5-year survival rates are 30–50%, even with optimal resection and perioperative systemic therapies. We sought to determine the important clinicopathological features and adjuvant treatments in terms of the prognosis of patients with operable-stage ampullary carcinomas. Materials and [...] Read more.
Background and Objectives: In ampullary cancer, 5-year survival rates are 30–50%, even with optimal resection and perioperative systemic therapies. We sought to determine the important clinicopathological features and adjuvant treatments in terms of the prognosis of patients with operable-stage ampullary carcinomas. Materials and Methods: We included 197 patients who underwent pancreaticoduodenectomy to treat ampullary carcinomas between December 2003 and May 2019. Demographics, clinical features, treatments, and outcomes/survival were analyzed. Results: The median disease-free survival (mDFS) and median overall survival (mOS) were 40.9 vs. 63.4 months, respectively. The mDFS was significantly lower in patients with lymphovascular invasion (p < 0.001) and lymph node involvement (p = 0.027). Potential predictors of decreased OS on univariate analysis included age ≥ 50 years (p = 0.045), poor performance status (p = 0.048), weight loss (p = 0.045), T3–T4 tumors (p = 0.018), surgical margin positivity (p = 0.01), lymph node involvement (p = 0.001), lymphovascular invasion (p < 0.001), perineural invasion (p = 0.007), and poor histological grade (p = 0.042). For the multivariate analysis, only nodal status (hazard ratio [HR]1.98; 95% confidence interval [CI], 1.08–3.65; p = 0.027) and surgical margin status (HR 2.61; 95% CI, 1.09–6.24; p = 0.03) were associated with OS. Conclusions: Nodal status and a positive surgical margin were independent predictors of a poor mOS for patients with ampullary carcinomas. Additional studies are required to explore the role of adjuvant therapy in patients with ampullary carcinomas. Full article
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17 pages, 5527 KiB  
Review
Scientific Research on Bioethanol in Brazil: History and Prospects for Sustainable Biofuel
by Adriana Grandis, Janaina da Silva Fortirer, Débora Pagliuso and Marcos S. Buckeridge
Sustainability 2024, 16(10), 4167; https://doi.org/10.3390/su16104167 (registering DOI) - 16 May 2024
Abstract
Despite the recent need for sustainable energy resources, bioenergy gained its spotlight in the 2000s. Sugarcane is a significant crop in terms of sugar and energy capacity, and it can be an alternative energy source to mitigate the effects of climate change. Bioenergy [...] Read more.
Despite the recent need for sustainable energy resources, bioenergy gained its spotlight in the 2000s. Sugarcane is a significant crop in terms of sugar and energy capacity, and it can be an alternative energy source to mitigate the effects of climate change. Bioenergy production from sugarcane in Brazil is one of the most efficient options. This production lends a centrality to biofuels’ importance in confronting climate change effects. The present article reviews the Brazilian history of this crop as a biofuel source, focusing on plants as a biomass. We highlight the historical changes related to scientific, technological, industrial, and environmental advances since the beginning of the 20th century. We describe how creating governmental institutes and disseminating scientific knowledge strengthened public policies that led Brazil to occupy leadership positions in producing, distributing, and using bioenergy throughout the country. The compiled data show the improvements and the new approaches needed to improve ethanol sugarcane use. We performed a bibliometric analysis to evaluate Brazilian science’s contribution to this process compared to other countries. Brazil’s history of science and investment in sugarcane biofuel development for transportation may be divided into two phases: ethanol-only and flex-fuel cars. A third phase is starting, directed to the SAF and ethanol-to-hydrogen era. Full article
(This article belongs to the Special Issue Recycling Biomass for Agriculture and Bioenergy Production)
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17 pages, 4452 KiB  
Article
Comparative Proteome Profiling of Extracellular Vesicles from Three Growth Phases of Haematococcus pluvialis under High Light and Sodium Acetate Stresses
by Qunju Hu, Yuanyuan Wang, Chaogang Wang and Xiaojun Yan
Int. J. Mol. Sci. 2024, 25(10), 5421; https://doi.org/10.3390/ijms25105421 (registering DOI) - 16 May 2024
Abstract
Extracellular vesicles (EVs) are nano-sized particles involved in intercellular communications that intrinsically possess many attributes as a modern drug delivery platform. Haematococcus pluvialis-derived EVs (HpEVs) can be potentially exploited as a high-value-added bioproduct during astaxanthin production. The encapsulation of HpEV cargo is [...] Read more.
Extracellular vesicles (EVs) are nano-sized particles involved in intercellular communications that intrinsically possess many attributes as a modern drug delivery platform. Haematococcus pluvialis-derived EVs (HpEVs) can be potentially exploited as a high-value-added bioproduct during astaxanthin production. The encapsulation of HpEV cargo is a crucial key for the determination of their biological functions and therapeutic potentials. However, little is known about the composition of HpEVs, limiting insights into their biological properties and application characteristics. This study examined the protein composition of HpEVs from three growth phases of H. pluvialis grown under high light (350 µmol·m−2·s−1) and sodium acetate (45 mM) stresses. A total of 2038 proteins were identified, the majority of which were associated with biological processes including signal transduction, cell proliferation, cell metabolism, and the cell response to stress. Comparative analysis indicated that H. pluvialis cells sort variant proteins into HpEVs at different physiological states. It was revealed that HpEVs from the early growth stage of H. pluvialis contain more proteins associated with cellular functions involved in primary metabolite, cell division, and cellular energy metabolism, while HpEVs from the late growth stage of H. pluvialis were enriched in proteins involved in cell wall synthesis and secondary metabolism. This is the first study to report and compare the protein composition of HpEVs from different growth stages of H. pluvialis, providing important information on the development and production of functional microalgal-derived EVs. Full article
(This article belongs to the Special Issue Advance in Plant Abiotic Stress)
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14 pages, 2722 KiB  
Article
Using Age-Stage Two-Sex Life Tables to Assess the Suitability of Three Solanaceous Host Plants for the Invasive Cotton Mealybug Phenacoccus solenopsis Tinsley
by Khaled Abbes, Ahlem Harbi, Emilio Guerrieri and Brahim Chermiti
Plants 2024, 13(10), 1381; https://doi.org/10.3390/plants13101381 (registering DOI) - 16 May 2024
Abstract
Phenacoccus solenopsis Tinsley (Hemiptera: Coccomorpha: Pseudococcidae), the cotton mealybug, is an invasive polyphagous species that has been extending its geographic range, posing a conspicuous threat to many Mediterranean crops of economic importance. These include three species of Solanaceae, namely Solanum lycopersicum L. (tomato), [...] Read more.
Phenacoccus solenopsis Tinsley (Hemiptera: Coccomorpha: Pseudococcidae), the cotton mealybug, is an invasive polyphagous species that has been extending its geographic range, posing a conspicuous threat to many Mediterranean crops of economic importance. These include three species of Solanaceae, namely Solanum lycopersicum L. (tomato), Solanum tuberosum L. (potato) and Solanum melongena L. (eggplant) all of which are economically important worldwide. In this study, we used age-stage two-sex life tables to investigate the suitability of these three plant species as hosts for P. solenopsis and to calculate pestfitness, life history parameters and population projection parameters. All tested host plants that were suitable for the pest and eggplant host plant induced a higher fecundity (276.50 ± 10.78 eggs/female), net reproductive rate (R0) (243.32 ± 15.83 offspring/female) and finite rate of increase (λ) (1.18 ± 0.0043 day−1) and more extended adult longevity (males: 6.50 ± 0.34 day and females: 24.15 ± 0.50 days). Population growth predictions over a period of 90 days of infestation, commencing with an initial population of 10 eggs showed that adult population size was 674,551 on tomato, 826,717 on potato and 355,139 on eggplant. Our data on plant host preference of P. solenopsis will aid the development of appropriate management strategies and achieve successful control of this invasive pest in key Mediterranean crop systems. Full article
(This article belongs to the Special Issue Plant–Insect Interactions II)
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13 pages, 2675 KiB  
Article
Impact of Public Policy and COVID-19 Pandemic on Hepatitis C Testing and Treatment in France, 2014–2021
by Cécile Brouard, Manon Schwager, Aude Expert, Nicolas Drewniak, Stella Laporal, Grégoire de Lagasnerie and Florence Lot
Viruses 2024, 16(5), 792; https://doi.org/10.3390/v16050792 (registering DOI) - 16 May 2024
Abstract
Given the World Health Organization’s target to eliminate the hepatitis C virus (HCV) by 2030, we assessed the impact of French public policies and the COVID-19 pandemic on HCV testing and initiation of direct-antiviral agents (DAAs). Using the French National Health Data System, [...] Read more.
Given the World Health Organization’s target to eliminate the hepatitis C virus (HCV) by 2030, we assessed the impact of French public policies and the COVID-19 pandemic on HCV testing and initiation of direct-antiviral agents (DAAs). Using the French National Health Data System, we identified individuals living in metropolitan France with at least one reimbursement for an anti-HCV test and those with a first delivery of DAAs between 1 January 2014 and 31 December 2021. During this period, the annual number of people tested increased each year between 3.3 (in 2015) and 9.3% (in 2021), except in 2020, with a drop of 8.3%, particularly marked in April (−55.0% compared to February 2020). A return to pre-pandemic testing levels was observed in 2021. The quarterly number of patients initiating DAAs presented an upward trend from Q1-2014 until mid-2017, with greater increases in Q1-2015, and Q1- and Q2-2017, concomitant with DAA access policies and availability of new therapies. Then, quarterly numbers decreased. A 65.5% drop occurred in April compared to February 2020. The declining DAA initiations since mid-2017, despite new measures improving access and screening efforts, could be due to the shrinking pool of patients requiring treatment and a need to increase awareness among undiagnosed infected people. Further action is needed to eliminate HCV in France. Full article
(This article belongs to the Special Issue Hepatitis C Virus: From Epidemiology to Treatment)
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14 pages, 2747 KiB  
Article
Pine Wilt Disease Segmentation with Deep Metric Learning Species Classification for Early-Stage Disease and Potential False Positive Identification
by Nikhil Thapa, Ridip Khanal, Bhuwan Bhattarai and Joonwhoan Lee
Electronics 2024, 13(10), 1951; https://doi.org/10.3390/electronics13101951 (registering DOI) - 16 May 2024
Abstract
Pine Wilt Disease poses a significant global threat to forests, necessitating swift detection methods. Conventional approaches are resource-intensive but utilizing deep learning on ortho-mapped images obtained from Unmanned Aerial Vehicles offers cost-effective and scalable solutions. This study presents a novel method for Pine [...] Read more.
Pine Wilt Disease poses a significant global threat to forests, necessitating swift detection methods. Conventional approaches are resource-intensive but utilizing deep learning on ortho-mapped images obtained from Unmanned Aerial Vehicles offers cost-effective and scalable solutions. This study presents a novel method for Pine Wilt Disease detection and classification using YOLOv8 for segmenting diseased areas, followed by cropping the diseased regions from the original image and applying Deep Metric Learning for classification. We trained a ResNet50 model using semi-hard triplet loss to obtain embeddings, and subsequently trained a Random Forest classifier tasked with identifying tree species and distinguishing false positives. Segmentation was favored over object detection due to its ability to provide pixel-level information, enabling the flexible extension of subsequent bounding boxes. Deep Metric Learning-based classification after segmentation was chosen for its effectiveness in handling visually similar images. The results indicate a mean Intersection over Union of 83.12% for segmentation, with classification accuracies of 98.7% and 90.7% on the validation and test sets, respectively. Full article
(This article belongs to the Special Issue Revolutionizing Medical Image Analysis with Deep Learning)
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21 pages, 2232 KiB  
Article
Whole Genome Sequence Analysis of Listeria monocytogenes Isolates Obtained from the Beef Production Chain in Gauteng Province, South Africa
by James Gana, Nomakorinte Gcebe, Rian Edward Pierneef, Yi Chen, Rebone Moerane and Abiodun Adewale Adesiyun
Microorganisms 2024, 12(5), 1003; https://doi.org/10.3390/microorganisms12051003 (registering DOI) - 16 May 2024
Abstract
The study used whole-genome sequencing (WGS) and bioinformatics analysis for the genomic characterization of 60 isolates of Listeria monocytogenes obtained from the beef production chain (cattle farms, abattoirs, and retail outlets) in Gauteng province, South Africa. The sequence types (STs), clonal complexes (CCs), [...] Read more.
The study used whole-genome sequencing (WGS) and bioinformatics analysis for the genomic characterization of 60 isolates of Listeria monocytogenes obtained from the beef production chain (cattle farms, abattoirs, and retail outlets) in Gauteng province, South Africa. The sequence types (STs), clonal complexes (CCs), and the lineages of the isolates were determined using in silico multilocus sequence typing (MLST). We used BLAST-based analyses to identify virulence and antimicrobial genes, plasmids, proviruses/prophages, and the CRISPR-Cas system. The study investigated any association of the detected genes to the origin in the beef production chain of the L. monocytogenes isolates. Overall, in 60 isolates of Listeria monocytogenes, there were seven STs, six CCs, forty-four putative virulence factors, two resistance genes, one plasmid with AMR genes, and three with conjugative genes, one CRISPR gene, and all 60 isolates were positive for proviruses/prophages. Among the seven STs detected, ST204 (46.7%) and ST2 (21.7%) were the most prominent, with ST frequency varying significantly (p < 0.001). The predominant CC detected were CC2 (21.7%) and CC204 (46.7%) in lineages I and II, respectively. Of the 44 virulence factors detected, 26 (across Listeria Pathogenicity Islands, LIPIs) were present in all the isolates. The difference in the detection frequency varied significantly (p < 0.001). The two AMR genes (fosX and vga(G)) detected were present in all 60 (100%) isolates of L. monocytogenes. The only plasmid, NF033156, was present in three (5%) isolates. A CRISPR-Cas system was detected in six (10%), and all the isolates carried proviruses/prophages. The source and sample type significantly affected the frequencies of STs and virulence factors in the isolates of L. monocytogenes. The presence of fosX and vga(G) genes in all L. monocytogenes isolates obtained from the three industries of the beef production chain can potentially cause therapeutic implications. Our study, which characterized L. monocytogenes recovered from the three levels in the beef production chain, is the first time genomics was performed on this type of data set in the country, and this provides insights into the health implications of Listeria. Full article
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16 pages, 10655 KiB  
Article
Synergistic Removal of Nitrogen and Phosphorus in Constructed Wetlands Enhanced by Sponge Iron
by Yiwei Shen, Meijia Hu, Yishen Xu, Mengni Tao, Lin Guan, Yu Kong, Shiwei Cao and Zhaoqian Jing
Water 2024, 16(10), 1414; https://doi.org/10.3390/w16101414 (registering DOI) - 16 May 2024
Abstract
Insufficient denitrification and limited phosphorus uptake hinder nitrogen and phosphorus removal in constructed wetlands (CWs). Sponge iron is a promising material for the removal of phosphorus and nitrogen because of its strong reducing power, high electronegativity, and inexpensive cost. The influence of factors [...] Read more.
Insufficient denitrification and limited phosphorus uptake hinder nitrogen and phosphorus removal in constructed wetlands (CWs). Sponge iron is a promising material for the removal of phosphorus and nitrogen because of its strong reducing power, high electronegativity, and inexpensive cost. The influence of factors including initial solution pH, dosage, and the Fe/C ratio was investigated. A vertical flow CW with sponge iron (CW-I) was established, and a traditional gravel bed (CW-G) was used as a control group. The kinetic analysis demonstrated that for both nitrogen and phosphorus, pseudo-second-order kinetics were superior. The theoretical adsorption capacities of sponge iron for nitrate (NO3-N) and phosphate (PO43-P) were 1294.5 mg/kg and 583.6 mg/kg, respectively. Under different hydraulic retention times (HRT), CW-I had better total nitrogen (TN) and total phosphorus (TP) removal efficiencies (6.08–15.18% and 5.00–20.67%, respectively) than CW-G. The enhancing effect of sponge iron on nitrogen and phosphorus removal was best when HRT was 48 h. The increase in HRT improved not only the nitrogen and phosphorus removal effects of CWs but also the reduction capacity of iron and the phosphorus removal effect. The main mechanisms of synergistic nitrogen and phosphorus removal were chemical reduction, ion exchange, electrostatic adsorption, and precipitation formation. Full article
(This article belongs to the Special Issue Constructed Wetlands for Water Treatment and Reuse)
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15 pages, 2053 KiB  
Article
Effects of Piper aduncum (Piperales: Piperaceae) Essential Oil and Its Main Component Dillapiole on Detoxifying Enzymes and Acetylcholinesterase Activity of Amblyomma sculptum (Acari: Ixodidae)
by Adalberto Alves Pereira Filho, Vladimir Fazito do Vale, Caio Marcio de Oliveira Monteiro, Mayara Macedo Barrozo, Mariana Alves Stanton, Lydia Fumiko Yamaguchi, Massuo Jorge Kato and Ricardo Nascimento Araújo
Int. J. Mol. Sci. 2024, 25(10), 5420; https://doi.org/10.3390/ijms25105420 (registering DOI) - 16 May 2024
Abstract
Amblyomma sculptum is a species of tick in the family Ixodidae, with equids and capybaras among its preferred hosts. In this study, the acaricidal activity of the essential oil (EO) from Piper aduncum and its main component, Dillapiole, were evaluated against larvae of [...] Read more.
Amblyomma sculptum is a species of tick in the family Ixodidae, with equids and capybaras among its preferred hosts. In this study, the acaricidal activity of the essential oil (EO) from Piper aduncum and its main component, Dillapiole, were evaluated against larvae of A. sculptum to establish lethal concentration values and assess the effects of these compounds on tick enzymes. Dillapiole exhibited slightly greater activity (LC50 = 3.38 mg/mL; 95% CI = 3.24 to 3.54) than P. aduncum EO (LC50 = 3.49 mg/mL; 95% CI = 3.36 to 3.62) against ticks. The activities of α-esterase (α-EST), β-esterase (β-EST), and glutathione-S-transferase (GST) enzymes in A. sculptum larvae treated with Dillapiole showed a significant increase compared to the control at all concentrations (LC5, LC25, LC50 and LC75), similar results were obtained with P. aduncum EO, except for α-EST, which did not differ from the control at the highest concentration (LC75). The results of the acetylcholinesterase (AChE) activity show an increase in enzyme activity at the two lower concentrations (LC5 and LC25) and a reduction in activity at the two higher, lethal concentrations (LC50 and LC75) compared to the control. These results suggest potential mechanisms of action for these natural acaricides and can provide guidance for the future development of potential plant-derived formulations. Full article
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12 pages, 603 KiB  
Article
Frequency of the Main Human Leukocyte Antigen A, B, DR, and DQ Loci Known to Be Associated with the Clearance or Persistence of Hepatitis C Virus Infection in a Healthy Population from the Southern Region of Morocco: A Preliminary Study
by Safa Machraoui, Khaoula Errafii, Ider Oujamaa, Moulay Yassine Belghali, Abdelmalek Hakmaoui, Saad Lamjadli, Fatima Ezzohra Eddehbi, Ikram Brahim, Yasmine Haida and Brahim Admou
Diseases 2024, 12(5), 106; https://doi.org/10.3390/diseases12050106 (registering DOI) - 16 May 2024
Abstract
Hepatitis C Virus (HCV) infection represents a significant global health challenge, with its natural course largely influenced by the host’s immune response. Human Leukocyte Antigen (HLA) molecules, particularly HLA class I and II, play a crucial role in the adaptive immune response against [...] Read more.
Hepatitis C Virus (HCV) infection represents a significant global health challenge, with its natural course largely influenced by the host’s immune response. Human Leukocyte Antigen (HLA) molecules, particularly HLA class I and II, play a crucial role in the adaptive immune response against HCV. The polymorphism of HLA molecules contributes to the variability in immune response, affecting the outcomes of HCV infection. This study aims to investigate the frequency of HLA A, B, DR, and DQ alleles known to be associated with HCV clearance or persistence in a healthy Moroccan population. Conducted at the University Hospital Center Mohammed VI, Marrakech, this study spanned from 2015 to 2022 and included 703 healthy Moroccan individuals. HLA class I and II typing was performed using complement-dependent cytotoxicity and polymerase chain reaction-based methodologies. The results revealed the distinct patterns of HLA-A, B, DRB1, and DQB1 alleles in the Moroccan population. Notably, alleles linked to favorable HCV outcomes, such as HLA-DQB1*0301, DQB1*0501, and DRB1*1101, were more prevalent. Conversely, alleles associated with increased HCV susceptibility and persistence, such as HLA-DQB1*02 and DRB1*03, were also prominent. Gender-specific variations in allele frequencies were observed, providing insights into genetic influences on HCV infection outcomes. The findings align with global trends in HLA allele associations with HCV infection outcomes. The study emphasizes the role of host genetics in HCV infection, highlighting the need for further research in the Moroccan community, including HCV-infected individuals. The prevalence of certain HLA alleles, both protective and susceptibility-linked, underscores the potential for a national HLA data bank in Morocco. Full article
(This article belongs to the Special Issue Infectious Disease Epidemiology 2024)
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20 pages, 1478 KiB  
Article
Public Opinion and the Energy Transition in East Asia: The Case of Taiwan
by Bruno Di Giusto, Joseph Lavallee, Igor Žilák and Yvonne Hu Di Giusto
Sustainability 2024, 16(10), 4164; https://doi.org/10.3390/su16104164 (registering DOI) - 16 May 2024
Abstract
Previous research in Western nations has established a clear connection between pro-environmental public opinion and clean energy transition policies aligned with Sustainable Development Goals 7 and 13. However, little is known about this relationship in East Asia, the most important region of the [...] Read more.
Previous research in Western nations has established a clear connection between pro-environmental public opinion and clean energy transition policies aligned with Sustainable Development Goals 7 and 13. However, little is known about this relationship in East Asia, the most important region of the world in terms of carbon emissions. Using the International Social Survey Program and Taiwan Social Change Survey results from 2010 and 2020, this study examines public opinion in Taiwan on environmental issues, comparing it with opinion in a group of 18 OECD countries. Results show high but stable support for the environment and the energy transition in Taiwan over this period, with no indications of climate denial. However, willingness to make sacrifices for the environment is sharply lower among the lower half of the income distribution, highlighting existing socioeconomic disparities and inequality. Further, political engagement around environmental issues remains relatively low in Taiwan compared to engagement in the OECD comparison group. This disjunction suggests a unique model of public opinion and policy outcomes in Taiwan, which is clearly distinct from patterns in the West. Comprehending this model is vital, considering East Asia’s necessary role in a global clean energy transition. Full article
(This article belongs to the Special Issue Public Policy and Green Governance 2nd Edition)
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19 pages, 11576 KiB  
Article
Validation of a New Ankle Brachial Index Measurement System Using Pulse Wave Velocity
by Juan David Romero-Ante, Esther Chicharro-Luna, Juliana Manrique-Córdoba, José María Vicente-Samper, Alba Gracia-Sánchez and José María Sabater-Navarro
Biosensors 2024, 14(5), 251; https://doi.org/10.3390/bios14050251 (registering DOI) - 16 May 2024
Abstract
Peripheral artery disease (PAD) is a common circulatory disorder characterized by the accumulation of fats, cholesterol, and other substances in the arteries that restrict blood flow to the extremities, especially the legs. The ankle brachial index (ABI) is a highly reliable and valid [...] Read more.
Peripheral artery disease (PAD) is a common circulatory disorder characterized by the accumulation of fats, cholesterol, and other substances in the arteries that restrict blood flow to the extremities, especially the legs. The ankle brachial index (ABI) is a highly reliable and valid non-invasive test for diagnosing PAD. However, the traditional method has limitations. These include the time required, the need for Doppler equipment, the training of clinical staff, and patient discomfort. PWV refers to the speed at which an arterial pressure wave propagates along the arteries, and this speed is conditioned by arterial elasticity and stiffness. To address these limitations, we have developed a system that uses electrocardiogram (ECG) and photoplethysmography (PPG) signals to calculate pulse wave velocity (PWV). We propose determining the ABI based on this calculation. Validation was performed on 22 diabetic patients, and the results demonstrate the accuracy of the system, maintaining a margin of ±0.1 compared with the traditional method. This confirms the correlation between PWV and ABI and positions this technique as a promising alternative to overcome some of the limitations of the conventional method. Full article
(This article belongs to the Section Biosensors and Healthcare)
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