The 2023 MDPI Annual Report has
been released!
 
35 pages, 58259 KiB  
Article
New Perceptions of Ancient Commerce Driven by Underwater Ancient Site Investigations: A Case Study of Xinfeng River Basin
by Song Zhang, Ming He, Guoliang Dong and Xianying Wang
Heritage 2024, 7(5), 2313-2347; https://doi.org/10.3390/heritage7050110 (registering DOI) - 30 Apr 2024
Abstract
In the 1950s and 1960s, to address the flooding issues and power shortage that hindered national construction, the Xinfeng River hydropower plant was planned and built to prevent floods, store water, and generate electricity. Consequently, many ancient ruins in the study area were [...] Read more.
In the 1950s and 1960s, to address the flooding issues and power shortage that hindered national construction, the Xinfeng River hydropower plant was planned and built to prevent floods, store water, and generate electricity. Consequently, many ancient ruins in the study area were drowned, including ancient post roads, channels, villages, towns, bridges, and other relic sites. By checking historical data and adopting integrated underwater acoustic detection, we conducted a comprehensive cultural-relics survey on the flooded area under Wanlv Lake in the Xinfeng River Basin. A side-scan sonar detection of the underwater relics within the flooded area confirmed the spatial distribution of cultural relics in the Xinfeng River Basin. It portrayed ancient people’s production and life scenarios, outlined the migration and trade history within the region and beyond, and contributed to the enrichment of the literature and understanding of ancient shipping and trade in the basin. Full article
(This article belongs to the Special Issue Advances in Archaeology and Anthropology of the Ancient World)
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15 pages, 6131 KiB  
Article
Driving Style Recognition Method Based on Risk Field and Masked Learning Techniques
by Shengye Jin, Zhengyu Zhu, Junli Liu and Shouqi Cao
Mathematics 2024, 12(9), 1363; https://doi.org/10.3390/math12091363 (registering DOI) - 30 Apr 2024
Abstract
With the increasing demand for road traffic safety assessment, global concerns about road safety have been rising. This is particularly evident with the widespread adoption of V2X (Vehicle-to-Everything) technology, where people are more intensively focused on how to leverage advanced technological means to [...] Read more.
With the increasing demand for road traffic safety assessment, global concerns about road safety have been rising. This is particularly evident with the widespread adoption of V2X (Vehicle-to-Everything) technology, where people are more intensively focused on how to leverage advanced technological means to effectively address challenges in traffic safety. Through the research of driving style recognition technology, accurate assessment of driving behavior and the provision of personalized safety prompts and warnings have become crucial for preventing traffic accidents. This paper proposes a risk field construction technique based on environmental data collected by in-vehicle sensors. This paper introduces a driving style recognition algorithm utilizing risk field visualization and mask learning technologies. The research results indicate that, compared to traditional classical models, the improved algorithm performs excellently in terms of accuracy, stability, and robustness, enhancing the accuracy of driving style recognition and enabling a more effective evaluation of road safety. Full article
(This article belongs to the Special Issue Application of Machine Learning and Data Mining)
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21 pages, 1330 KiB  
Review
Important Factors Affecting Induction of Cell Death, Oxidative Stress and DNA Damage by Nano- and Microplastic Particles In Vitro
by Kamil Płuciennik, Paulina Sicińska, Weronika Misztal and Bożena Bukowska
Cells 2024, 13(9), 768; https://doi.org/10.3390/cells13090768 (registering DOI) - 30 Apr 2024
Abstract
We have described the influence of selected factors that increase the toxicity of nanoplastics (NPs) and microplastics (MPs) with regard to cell viability, various types of cell death, reactive oxygen species (ROS) induction, and genotoxicity. These factors include plastic particle size (NPs/MPs), zeta [...] Read more.
We have described the influence of selected factors that increase the toxicity of nanoplastics (NPs) and microplastics (MPs) with regard to cell viability, various types of cell death, reactive oxygen species (ROS) induction, and genotoxicity. These factors include plastic particle size (NPs/MPs), zeta potential, exposure time, concentration, functionalization, and the influence of environmental factors and cell type. Studies have unequivocally shown that smaller plastic particles are more cytotoxic, penetrate cells more easily, increase ROS formation, and induce oxidative damage to proteins, lipids, and DNA. The toxic effects also increase with concentration and incubation time. NPs with positive zeta potential are also more toxic than those with a negative zeta potential because the cells are negatively charged, inducing stronger interactions. The deleterious effects of NPs and MPs are increased by functionalization with anionic or carboxyl groups, due to greater interaction with cell membrane components. Cationic NPs/MPs are particularly toxic due to their greater cellular uptake and/or their effects on cells and lysosomal membranes. The effects of polystyrene (PS) vary from one cell type to another, and normal cells are more sensitive to NPs than cancerous ones. The toxicity of NPs/MPs can be enhanced by environmental factors, including UV radiation, as they cause the particles to shrink and change their shape, which is a particularly important consideration when working with environmentally-changed NPs/MPs. In summary, the cytotoxicity, oxidative properties, and genotoxicity of plastic particles depends on their concentration, duration of action, and cell type. Also, NPs/MPs with a smaller diameter and positive zeta potential, and those exposed to UV and functionalized with amino groups, demonstrate higher toxicity than larger, non-functionalized and environmentally-unchanged particles with a negative zeta potential. Full article
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25 pages, 1488 KiB  
Article
Integrated Analysis of Genomic and Genome-Wide Association Studies Identified Candidate Genes for Nutrigenetic Studies in Flavonoids and Vascular Health: Path to Precision Nutrition for (Poly)phenols
by Tatjana Ruskovska, Filip Postolov and Dragan Milenkovic
Nutrients 2024, 16(9), 1362; https://doi.org/10.3390/nu16091362 (registering DOI) - 30 Apr 2024
Abstract
Flavonoids exert vasculoprotective effects in humans, but interindividual variability in their action has also been reported. This study aims to identify genes that are associated with vascular health effects of flavonoids and whose polymorphisms could explain interindividual variability in response to their intake. [...] Read more.
Flavonoids exert vasculoprotective effects in humans, but interindividual variability in their action has also been reported. This study aims to identify genes that are associated with vascular health effects of flavonoids and whose polymorphisms could explain interindividual variability in response to their intake. Applying the predetermined literature search criteria, we identified five human intervention studies reporting positive effects of flavonoids on vascular function together with global genomic changes analyzed using microarray methods. Genes involved in vascular dysfunction were identified from genome-wide association studies (GWAS). By extracting data from the eligible human intervention studies, we obtained 5807 differentially expressed genes (DEGs). The number of identified upstream regulators (URs) varied across the studies, from 227 to 1407. The search of the GWAS Catalog revealed 493 genes associated with vascular dysfunction. An integrative analysis of transcriptomic data with GWAS genes identified 106 candidate DEGs and 42 candidate URs, while subsequent functional analyses and a search of the literature identified 20 top priority candidate genes: ALDH2, APOE, CAPZA1, CYP11B2, GNA13, IL6, IRF5, LDLR, LPL, LSP1, MKNK1, MMP3, MTHFR, MYO6, NCR3, PPARG, SARM1, TCF20, TCF7L2, and TNF. In conclusion, this integrated analysis identifies important genes to design future nutrigenetic studies for development of precision nutrition for polyphenols. Full article
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13 pages, 1479 KiB  
Article
MicroRNA-135b-5p Is a Pathologic Biomarker in the Endothelial Cells of Arteriovenous Malformations
by Joon Seok Lee, Gyeonghwa Kim, Jong Ho Lee, Jeong Yeop Ryu, Eun Jung Oh, Hyun Mi Kim, Suin Kwak, Keun Hur and Ho Yun Chung
Int. J. Mol. Sci. 2024, 25(9), 4888; https://doi.org/10.3390/ijms25094888 (registering DOI) - 30 Apr 2024
Abstract
Arteriovenous malformations (AVMs) are congenital vascular anomalies with a poor prognosis. AVMs are considered intractable diseases, as there is no established approach for early diagnosis and treatment. Therefore, this study aimed to provide new evidence by analyzing microRNAs (miRNAs) associated with AVM. We [...] Read more.
Arteriovenous malformations (AVMs) are congenital vascular anomalies with a poor prognosis. AVMs are considered intractable diseases, as there is no established approach for early diagnosis and treatment. Therefore, this study aimed to provide new evidence by analyzing microRNAs (miRNAs) associated with AVM. We present fundamental evidence for the early diagnosis and treatment of AVM by analyzing miRNAs in the endothelial cells of AVMs. This study performed sequencing and validation of miRNAs in endothelial cells from normal and AVM tissues. Five upregulated and two downregulated miRNAs were subsequently analyzed under hypoxia and vascular endothelial growth factor (VEGF) treatment by one-way analysis of variance (ANOVA). Under hypoxic conditions, miR-135b-5p was significantly upregulated in the AVM compared to that under normal conditions, corresponding to increased endothelial activity (p-value = 0.0238). VEGF treatment showed no significant increase in miR-135b-5p under normal conditions, however, a surge in AVM was observed. Under both hypoxia and VEGF treatment, comparison indicated a downregulation of miR-135b-5p in AVM. Therefore, miR-135b-5p was assumed to affect the pathophysiological process of AVM and might play a vital role as a potential biomarker of AVMs for application related to diagnosis and treatment. Full article
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19 pages, 6712 KiB  
Article
An Assessment of Accessibility from a Socially Sustainable Urban Mobility Approach in Mass Transit Projects: Contributions from the Northern Central American Triangle
by Carlos Ernesto Grande-Ayala
Sustainability 2024, 16(9), 3766; https://doi.org/10.3390/su16093766 (registering DOI) - 30 Apr 2024
Abstract
This article aims to address the lack of research on the social dimension of sustainability, also known as social sustainability, in urban mobility projects, primarily in cities of the Global South. It proposes a strategy to partially assess social sustainability, focusing on accessibility, [...] Read more.
This article aims to address the lack of research on the social dimension of sustainability, also known as social sustainability, in urban mobility projects, primarily in cities of the Global South. It proposes a strategy to partially assess social sustainability, focusing on accessibility, which is one of the key dimensions for conducting such an evaluation. To this end, a comparative analysis of three study cases is conducted in the capital cities of the Northern Central American Triangle (NCAT) before and after the construction of bus rapid transit (BRT) projects between 2000 and 2020. Accessibility is evaluated through equity and spatial efficiency indicators obtained through geographical information system (GIS) modeling, including layers representing transportation networks, populated areas, and locations of basic urban facilities. The result is an unprecedented assessment of accessibility in the NCAT capitals, which shows how the Guatemala City BRT project has improved the city’s social sustainability by reducing access times to basic urban facilities, mainly public health clinics and educational facilities, and narrowing the inequality gap as compared to projects in San Salvador and Tegucigalpa, the other capital cities in the NCAT. Additionally, it is emphasized that this methodology can be replicated in the Global South while considering the scarcity of information and the use of open-source software in the process. Full article
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18 pages, 4152 KiB  
Article
Distinguishing Saharan Dust Plume Sources in the Tropical Atlantic Using Elemental Indicators
by Daniel E. Yeager and Vernon R. Morris
Atmosphere 2024, 15(5), 554; https://doi.org/10.3390/atmos15050554 (registering DOI) - 30 Apr 2024
Abstract
The Sahara Desert is the largest contributor of global atmospheric dust aerosols impacting regional climate, health, and ecosystems. The climate effects of these dust aerosols remain uncertain due, in part, to climate model uncertainty of Saharan source region contributions and aerosol microphysical properties. [...] Read more.
The Sahara Desert is the largest contributor of global atmospheric dust aerosols impacting regional climate, health, and ecosystems. The climate effects of these dust aerosols remain uncertain due, in part, to climate model uncertainty of Saharan source region contributions and aerosol microphysical properties. This study distinguishes source region elemental signatures of Saharan dust aerosols sampled during the 2015 Aerosols Ocean Sciences Expedition (AEROSE) in the tropical Atlantic. During the 4-week campaign, cascade impactors size-dependently collected airborne Saharan dust particulate upon glass microfiber filters. Inductively Coupled Plasma Mass Spectrometry (ICP-MS) analysis differentiated metal isotope concentrations within filter samples from various AEROSE dust sampling periods. Back-trajectory analysis and NOAA satellite aerosol optical depth retrievals confirmed source regions of AEROSE ’15 dust samples. Pearson correlational statistics of source region activity and dust isotope concentrations distinguished the elemental signatures of North African potential source areas (PSAs). This study confirmed that elemental indicators of these PSAs remain detectable within dust samples collected far into the marine boundary layer of the tropical Atlantic. Changes detected in dust elemental indicators occurred on sub-weekly timescales across relatively small sampling distances along the 23W parallel of the tropical Atlantic. PSA-2 emissions, covering the western coast of the Sahara, were very strongly correlated (R2 > 0.79) with Ca-44 isotope ratios in AEROSE dust samples; PSA-2.5 emissions, covering eastern Mauritania and western Mali, were very strongly correlated with K-39 ratios; PSA-3 emissions, spanning southwestern Algeria and eastern Mali, were very strongly correlated with Fe-57 and Ti-48 ratios. The abundance of Ca isotopes from PSA-2 was attributed to calcite minerals from dry lakebeds and phosphorous mining activities in Western Sahara, based on source region analysis. The correlation between K isotope ratios and PSA-2.5 was a likely indicator of illite minerals near the El Djouf Desert region, according to corroboration with mineral mapping studies. Fe and Ti ratio correlations with PSA-3 observed in this study were likely indicators of iron and titanium oxides from Sahelian sources still detectable in Atlantic Ocean observations. The rapid changes in isotope chemistry found in AEROSE dust samples provide a unique marker of Saharan source regions and their relative contributions to desert outflows in the Atlantic. These elemental indicators provide source region apportionments of Sahara Desert aerosol flux and deposition into the Atlantic Ocean, as well as a basis for model and satellite validation of Saharan dust emissions for regional climate assessments. Full article
(This article belongs to the Section Aerosols)
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18 pages, 2592 KiB  
Article
Biochemical Responses in Populus tremula: Defending against Sucking and Leaf-Chewing Insect Herbivores
by Filip Pastierovič, Alina Kalyniukova, Jaromír Hradecký, Ondřej Dvořák, Jan Vítámvás, Kanakachari Mogilicherla and Ivana Tomášková
Plants 2024, 13(9), 1243; https://doi.org/10.3390/plants13091243 (registering DOI) - 30 Apr 2024
Abstract
The main biochemical traits were estimated in poplar leaves under biotic attack (aphids and spongy moth infestation). Changes in the abundance of bioactive compounds in genetically uniform individuals of European aspen (Populus tremula), such as proline, polyphenolic compounds, chlorophylls a and [...] Read more.
The main biochemical traits were estimated in poplar leaves under biotic attack (aphids and spongy moth infestation). Changes in the abundance of bioactive compounds in genetically uniform individuals of European aspen (Populus tremula), such as proline, polyphenolic compounds, chlorophylls a and b, and volatile compounds, were determined between leaves damaged by sucking insects (aphid—Chaitophorus nassonowi) and chewing insects (spongy moth—Lymantria dispar) compared to uninfected leaves. Among the nine analyzed phenolic compounds, only catechin and procyanidin showed significant differences between the control leaves and leaves affected by spongy moths or aphids. GC-TOF-MS volatile metabolome analysis showed the clear separation of the control versus aphids-infested and moth-infested leaves. In total, the compounds that proved to have the highest explanatory power for aphid-infested leaves were 3-hexenal and 5-methyl-2-furanone, and for moth-infested leaves, trans-α-farnesene and 4-cyanocyclohexane. The aphid-infested leaves contained around half the amount of chlorophylls and twice the amount of proline compared to uninfected leaves, and these results evidenced that aphids influence plant physiology more than chewing insects. Full article
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20 pages, 835 KiB  
Review
The Current State of Evidence Regarding Audiologist-Provided Cognitive Behavioural Therapy for the Management of Tinnitus: A Scoping Review
by Louise A. Burke and Amr El Refaie
Audiol. Res. 2024, 14(3), 412-431; https://doi.org/10.3390/audiolres14030035 (registering DOI) - 30 Apr 2024
Abstract
Background: Cognitive behavioural therapy (CBT) for tinnitus management is effective and widely recommended by national and international practice guidelines. However, all the evidence for CBT so far has come from Psychologist-led programs, and the potential role of Audiologists in providing CBT for tinnitus [...] Read more.
Background: Cognitive behavioural therapy (CBT) for tinnitus management is effective and widely recommended by national and international practice guidelines. However, all the evidence for CBT so far has come from Psychologist-led programs, and the potential role of Audiologists in providing CBT for tinnitus remains an important consideration. Objectives: This study sets out to systematically map the body of literature relating to Audiologist-provided CBT for tinnitus, in order to summarise the current state of evidence and determine directions for future research. Eligibility criteria: Sources were eligible for inclusion if they addressed the concept of Audiologist-provided CBT. No restrictions were imposed on the date of publication. Only sources published in English were included. Sources of evidence: A wide range of primary and secondary literature sources were sought. Charting methods: Data from included sources were charted systematically using a pre-designed data charting form. Results: Of the 267 identified sources, 30 were included in this review. This included both primary and secondary literature sources. Primary sources were compared and showed variation across Audiologist-provided CBT programs both in terms of procedural details and from a research standpoint. Conclusions: A growing body of evidence has addressed the concept of Audiologist-provided CBT. Directions for future research include further primary research with an increased focus on face-to-face Audiologist-provided CBT, and a comparison of the outcomes of Audiologist-provided vs. Psychologist-provided CBT. Full article
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13 pages, 415 KiB  
Article
Unveiling Anxiety Factors in Orthorexia Nervosa: A Qualitative Exploration of Fears and Coping Strategies
by Panagiota Tragantzopoulou and Vaitsa Giannouli
Healthcare 2024, 12(9), 925; https://doi.org/10.3390/healthcare12090925 (registering DOI) - 30 Apr 2024
Abstract
Orthorexia nervosa represents a controversial phenomenon in the realm of eating practices, characterized by an obsessive fixation on consuming only foods deemed ’healthy’, and a preoccupation with food purity. While the existing literature has identified the presence of stressful behaviors among individuals with [...] Read more.
Orthorexia nervosa represents a controversial phenomenon in the realm of eating practices, characterized by an obsessive fixation on consuming only foods deemed ’healthy’, and a preoccupation with food purity. While the existing literature has identified the presence of stressful behaviors among individuals with orthorexia, the precise factors and circumstances eliciting these stress-inducing emotions remain the subject of ongoing inquiry. This study aims to explore the triggers and situations that precipitate stressful beliefs and emotions among individuals who self-identify as preoccupied with healthy eating, as well as the coping mechanisms developed to manage these feelings. Through conducting one-to-one interviews with thirteen individuals, thematic analysis was employed to elucidate the nuances of their experiences. Participants articulated concerns regarding the contamination of foods available in supermarkets and restaurants, thereby prompting the meticulous selection of food sources and aversion to dining out. The prospect of trying new foods and engaging in social gatherings involving food emerged as anxiety-inducing scenarios, prompting individuals to adhere to monotonous dietary patterns and impose self-isolation. Additionally, medical appointments were perceived as stressful, driven by health concerns underpinning the adoption of stringent dietary practices. These findings underscore the spectrum of fears and coping mechanisms exhibited by individuals with orthorexia nervosa, which hold profound implications for their overall well-being. Full article
(This article belongs to the Section Nursing)
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13 pages, 5262 KiB  
Article
Metal-Doped NASICON/Polymer Composite Solid Electrolyte for Lithium Titania Anode in Lithium-Ion Batteries
by Chien-Te Hsieh, Tzu-Shaing Cho, Jeng-Kuei Chang and Jagabandhu Patra
Polymers 2024, 16(9), 1251; https://doi.org/10.3390/polym16091251 (registering DOI) - 30 Apr 2024
Abstract
This study reports five types of metal-doped (Co, Cu, Sn, V, and Zr) NASICON-type Li1.3Al0.3Ti1.7(PO4)3 (LATP)/polymer composite solid electrolytes (CSEs) enabling Li4Ti5O12 (LTO) anodes to have high rate capability [...] Read more.
This study reports five types of metal-doped (Co, Cu, Sn, V, and Zr) NASICON-type Li1.3Al0.3Ti1.7(PO4)3 (LATP)/polymer composite solid electrolytes (CSEs) enabling Li4Ti5O12 (LTO) anodes to have high rate capability and excellent cycling performance. The high Li+-conductivity LATP samples are successfully synthesized through a modified sol–gel method followed by thermal calcination. We find that the cation dopants clearly influence the substitution of Al for Ti, with the type of dopant serving as a crucial factor in determining the ionic conductivity and interfacial resistance of the solid electrolyte. The CSE containing poly(vinylidene fluoride-co-hexafluoropropylene) (PVDF-HFP), lithium bis(trifluoromethanesulfonyl)imide (LiTFSI), and Sn-LATP shows an ionic conductivity of 1.88 × 10−4 S cm−1 at ambient temperature. The optimum conductivity can be attributed to alterations in the lattice parameters and Li+ transport pathways owing to Sn doping. The solid-state cell equipped with the LTO-supported CSE containing Sn-LATP fillers demonstrates both excellent high rate capability at 5 C (with a capacity retention of 86% compared to the value measured at 0.2 C) and superior cycling stability, maintaining high Coulombic efficiency (>99.0%) over 510 cycles. These findings indicate that the proposed CSE is highly promising for use in solid-state lithium batteries with desirable charge–discharge properties and high durability. Full article
(This article belongs to the Special Issue Polymer Composite Materials for Energy Storage)
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23 pages, 8746 KiB  
Review
Recent Advances in Catalytic Compounds Developed by Thermal Treatment of (Zr-Based) Metal–Organic Frameworks
by Catarina E. S. Ferreira, Salete S. Balula and Luís Cunha-Silva
Compounds 2024, 4(2), 315-337; https://doi.org/10.3390/compounds4020017 (registering DOI) - 30 Apr 2024
Abstract
Metal–organic frameworks (MOFs) have been the subject of extensive scientific investigation in the last three decades and, currently, they make up one of the types of compounds most studied for their potential application in a wide range of distinct catalytic processes. Pristine MOF [...] Read more.
Metal–organic frameworks (MOFs) have been the subject of extensive scientific investigation in the last three decades and, currently, they make up one of the types of compounds most studied for their potential application in a wide range of distinct catalytic processes. Pristine MOF compounds provide several intriguing benefits for catalytic applications, including large interior surface areas and high densities of active sites; high catalytic reaction rates per volume; post-synthesis modifications with complementary catalytic groups; and the ability for multiple functional groups to catalyze the reaction. For most large-scale catalytic applications, including those in fuel processing, gas emission reduction, and chemical synthesis, pristine MOFs often show limited stabilities and opportunities for regeneration at high temperatures. As a result, the real applications of MOFs in these technologies are likely to be constrained, and a controlled thermal modification to prepare MOF-derivative compounds has been applied to induce crystalline structural changes and increase the structural stability of the MOFs, enhancing their potential applicability in more severe catalytic processes. Recent advances concerning the use of this strategy to boost the catalytic potential of MOF-derivative compounds, particularly for stable Zr-based MOFs, are outlined in this short review article. Full article
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12 pages, 10761 KiB  
Article
Kissing Balloon-Stent Technique for Simple Bifurcation Lesions
by Adnan Kassier, Kameel Kassab and Tim A. Fischell
J. Clin. Med. 2024, 13(9), 2645; https://doi.org/10.3390/jcm13092645 (registering DOI) - 30 Apr 2024
Abstract
Background: Coronary bifurcation lesions are commonly encountered during coronary angiography. The management of bifurcation lesions remains challenging, with various bifurcation techniques being available and outcomes varying depending on the Medina classification and operator experience. Methods: We present a short case series and the [...] Read more.
Background: Coronary bifurcation lesions are commonly encountered during coronary angiography. The management of bifurcation lesions remains challenging, with various bifurcation techniques being available and outcomes varying depending on the Medina classification and operator experience. Methods: We present a short case series and the outcomes of a new bifurcation technique for the management of simple Medina ‘0,0,1’ and ‘0,0,1’ bifurcation lesions using the kissing balloon-stent technique (kissing BS). Results: We retrospectively identified 8 patients who underwent bifurcation stenting using the kissing Balloon-Stent technique, along with their clinical and angiographic follow-up outcomes. We also describe the benefits and limitations of the technique, delineate the potential mechanisms of target lesion failure, and outline appropriate patient selection. Conclusions: Kissing Balloon-Stent technique is a simple single stent technique that is safe and feasible in select patients with Medina ‘0,0,1’ and ‘0,0,1’ bifurcation lesions. Full article
(This article belongs to the Special Issue Coronary Artery Disease Interventions)
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12 pages, 1938 KiB  
Article
Analysis of Cellular Stress Assay Parameters and Intracellular ATP in Platelets: Comparison of Platelet Preparation Methods
by Belay Tessema, Janine Haag, Ulrich Sack and Brigitte König
Int. J. Mol. Sci. 2024, 25(9), 4885; https://doi.org/10.3390/ijms25094885 (registering DOI) - 30 Apr 2024
Abstract
Platelets are metabolically active, anucleated and small circulating cells mainly responsible for the prevention of bleeding and maintenance of hemostasis. Previous studies showed that platelets mitochondrial content, function, and energy supply change during several diseases such as HIV/AIDS, COVID-19, pulmonary arterial hypertension, and [...] Read more.
Platelets are metabolically active, anucleated and small circulating cells mainly responsible for the prevention of bleeding and maintenance of hemostasis. Previous studies showed that platelets mitochondrial content, function, and energy supply change during several diseases such as HIV/AIDS, COVID-19, pulmonary arterial hypertension, and in preeclampsia during pregnancy. These changes in platelets contributed to the severity of diseases and mortality. In our previous studies, we have shown that the seahorse-based cellular stress assay (CSA) parameters are crucial to the understanding of the mitochondrial performance in peripheral blood mononuclear cells (PBMCS). Moreover, the results of CSA parameters were significantly influenced by the PBMC preparation methods. In this study, we assessed the correlation of CSA parameters and intracellular ATP content in platelets and evaluated the effects of platelet preparation methods on the results of CSA parameters and intracellular ATP content. We compared the results of CSA parameters and intracellular ATP content in platelets isolated by density centrifugation with Optiprep and simple centrifugation of blood samples without Optiprep. Platelets isolated by centrifugation with Optiprep showed a higher spare capacity, basal respiration, and maximal respiration than those isolated without Optiprep. There was a clear correlation between basal respiration and maximal respiration, and the whole-ATP content in both isolation methods. Moreover, a positive correlation was observed between the relative spare capacity and whole-cell ATP content. In conclusion, the results of seahorse-based CSA parameters and intracellular ATP content in platelets are markedly influenced by the platelet isolation methods employed. The results of basal respiration and maximal respiration are hallmarks of cellular activity in platelets, and whole-cell ATP content is a potential hint for basic platelet viability. We recommend further studies to evaluate the role of CSA parameters and intracellular ATP content in platelets as biomarkers for the diagnosis and prediction of disease states. Full article
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)
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14 pages, 7061 KiB  
Article
Colorectal Cancer Detection via Metabolites and Machine Learning
by Rachel Yang, Igor F. Tsigelny, Santosh Kesari and Valentina L. Kouznetsova
Curr. Issues Mol. Biol. 2024, 46(5), 4133-4146; https://doi.org/10.3390/cimb46050254 (registering DOI) - 30 Apr 2024
Abstract
Today, colorectal cancer (CRC) diagnosis is performed using colonoscopy, which is the current, most effective screening method. However, colonoscopy poses risks of harm to the patient and is an invasive process. Recent research has proven metabolomics as a potential, non-invasive detection method, which [...] Read more.
Today, colorectal cancer (CRC) diagnosis is performed using colonoscopy, which is the current, most effective screening method. However, colonoscopy poses risks of harm to the patient and is an invasive process. Recent research has proven metabolomics as a potential, non-invasive detection method, which can use identified biomarkers to detect potential cancer in a patient’s body. The aim of this study is to develop a machine-learning (ML) model based on chemical descriptors that will recognize CRC-associated metabolites. We selected a set of metabolites found as the biomarkers of CRC, confirmed that they participate in cancer-related pathways, and used them for training a machine-learning model for the diagnostics of CRC. Using a set of selective metabolites and random compounds, we developed a range of ML models. The best performing ML model trained on Stage 0–2 CRC metabolite data predicted a metabolite class with 89.55% accuracy. The best performing ML model trained on Stage 3–4 CRC metabolite data predicted a metabolite class with 95.21% accuracy. Lastly, the best-performing ML model trained on Stage 0–4 CRC metabolite data predicted a metabolite class with 93.04% accuracy. These models were then tested on independent datasets, including random and unrelated-disease metabolites. In addition, six pathways related to these CRC metabolites were also distinguished: aminoacyl-tRNA biosynthesis; glyoxylate and dicarboxylate metabolism; glycine, serine, and threonine metabolism; phenylalanine, tyrosine, and tryptophan biosynthesis; arginine biosynthesis; and alanine, aspartate, and glutamate metabolism. Thus, in this research study, we created machine-learning models based on metabolite-related descriptors that may be helpful in developing a non-invasive diagnosis method for CRC. Full article
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14 pages, 2653 KiB  
Article
WordBlitz: An Efficient Hard-Label Textual Adversarial Attack Method Jointly Leveraging Adversarial Transferability and Word Importance
by Xiangge Li, Hong Luo and Yan Sun
Appl. Sci. 2024, 14(9), 3831; https://doi.org/10.3390/app14093831 (registering DOI) - 30 Apr 2024
Abstract
Existing textual attacks mostly perturb keywords in sentences to generate adversarial examples by relying on the prediction confidence of victim models. In practice, attackers can only access the prediction label, meaning that the victim model can easily defend against such hard-label attacks by [...] Read more.
Existing textual attacks mostly perturb keywords in sentences to generate adversarial examples by relying on the prediction confidence of victim models. In practice, attackers can only access the prediction label, meaning that the victim model can easily defend against such hard-label attacks by denying access based on the attack’s frequency. In this paper, we propose an efficient hard-label attack approach, called WordBlitz. First, based on the adversarial transferability, we train a substitute model to initialize the attack parameter set, including a candidate pool and two weight tables of keywords and candidate words. Then, adversarial examples are generated and optimized under the guidance of the two weight tables. During optimization, we design a hybrid local search algorithm with word importance to find the globally optimal solution while updating the two weight tables according to the attack results. Finally, the non-adversarial text generated during perturbation optimization is added to the training of the substitute model as data augmentation to improve the adversarial transferability. Experimental results show that WordBlitz surpasses the baseline in terms of better effectiveness, higher efficiency, and lower cost. Its efficiency is especially pronounced in scenarios with broader search spaces, and its attack success rate on a Chinese dataset is higher than on baselines. Full article
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22 pages, 6238 KiB  
Article
Development and Validation of a Novel Surface Defect Index (SDI) Method for the Effective Quality Evaluation of Concrete Surfaces
by Fatima Zohra Badi, Salah Eddine Bensebti, Abdelhafid Chabane, Cherif Belebchouche, Tien Tung Ngo, El Hadj Kadri and Slawomir Czarnecki
Appl. Sci. 2024, 14(9), 3828; https://doi.org/10.3390/app14093828 (registering DOI) - 30 Apr 2024
Abstract
Concrete defects have a significant impact on concrete constructions. These defects should be considered not only aesthetic defects but also structural defects. In this study, a novel Surface Defect Index (SDI) method was developed to quantify the defect volume according to liquids’ penetrating [...] Read more.
Concrete defects have a significant impact on concrete constructions. These defects should be considered not only aesthetic defects but also structural defects. In this study, a novel Surface Defect Index (SDI) method was developed to quantify the defect volume according to liquids’ penetrating properties by applying ready-mixed plaster (RMP). The SDI refers to the volumetric proportion of all apparent and unapparent defects in a given area of concrete, and it is expressed as a percentage of the total volume affected by defects. The proposed SDI method was validated and tested under various controlled defect configurations. Regardless of the specific characteristics of each defect configuration, the SDI method consistently demonstrated a high level of consistency, repeatability, and reproducibility, with coefficients of variation (CVr and CVR) below 5% and with correlation coefficients of R2 = 0.9968. The method succeeded in assessing the surface quality levels through the SDI, demonstrating a significant correlation between this index and the volume of defects. The proposed index was tested on real concrete surfaces, affirming its efficacy in accurately quantifying the volume of surface defects; thus, it can provide an important metric for quality control. Moreover, it provides an excellent evaluation of the quality of concrete surfaces. Full article
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28 pages, 548 KiB  
Article
Enhancing Network Attack Detection Accuracy through the Integration of Large Language Models and Synchronized Attention Mechanism
by Yuzhe Bai, Min Sun, Liman Zhang, Yinong Wang, Sihan Liu, Yanqiu Liu, Jingling Tan, Yingqiu Yang and Chunli Lv
Appl. Sci. 2024, 14(9), 3829; https://doi.org/10.3390/app14093829 (registering DOI) - 30 Apr 2024
Abstract
In this study, we propose a novel method for detecting cyberattack behaviors by leveraging the combined strengths of large language models and a synchronized attention mechanism. Extensive experiments conducted on diverse datasets, including server logs, financial behaviors, and comment data, demonstrate the significant [...] Read more.
In this study, we propose a novel method for detecting cyberattack behaviors by leveraging the combined strengths of large language models and a synchronized attention mechanism. Extensive experiments conducted on diverse datasets, including server logs, financial behaviors, and comment data, demonstrate the significant advantages of this method over existing models such as Transformer, BERT, OPT-175B, LLaMa, and ChatGLM3-6B in key performance metrics such as precision, recall, and accuracy. For instance, on the server log dataset, the method achieved a precision of 93%, a recall of 91%, and an accuracy of 92%; on the financial behavior dataset, it reached a precision of 90%, a recall of 87%, and an accuracy of 89%; and on the comment data dataset, it excelled with a precision of 95%, a recall of 93%, and an accuracy of 94%. The introduction of a synchronized attention mechanism and a newly designed synchronized loss function proved especially effective, enhancing the method’s ability to process multi-source data and providing superior performance in identifying complex cyberattack patterns. Ablation experiments further validated the crucial roles of these innovations in boosting model performance: the synchronous attention mechanism substantially improved the model’s precision, recall, and accuracy to 93%, 89%, and 91% respectively, far exceeding other attention mechanisms. Similarly, the synchronized loss showcased a significant advantage, achieving the best performance across all tested metrics compared to traditional cross-entropy loss, focal loss, and MSE. These results underscore the method’s ability to deeply mine and analyze semantic information and contextual relationships within text data as well as to effectively integrate and process multimodal data, thereby offering strong technical support for the accurate and efficient detection of cyberattack behaviors. Full article
(This article belongs to the Special Issue Network Intrusion Detection and Attack Identification)
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14 pages, 4514 KiB  
Article
Potential Hepatoprotective Effects of Allicin on Carbon Tetrachloride-Induced Acute Liver Injury in Mice by Inhibiting Oxidative Stress, Inflammation, and Apoptosis
by Qianmei Gong, Xiaoming Wang, Yongshi Liu, Heling Yuan, Zifeng Ge, Yuzhou Li, Jinhu Huang, Yufan Liu, Ming Chen, Wenjun Xiao, Ruiting Liu, Rongmei Shi and Liping Wang
Toxics 2024, 12(5), 328; https://doi.org/10.3390/toxics12050328 (registering DOI) - 30 Apr 2024
Abstract
The global burden of liver disease is enormous, which highlights the need for effective hepatoprotective agents. It was reported that allicin exhibits protective effects against a range of diseases. In this study, we further evaluated allicin’s effect and mechanism in acute hepatic injury. [...] Read more.
The global burden of liver disease is enormous, which highlights the need for effective hepatoprotective agents. It was reported that allicin exhibits protective effects against a range of diseases. In this study, we further evaluated allicin’s effect and mechanism in acute hepatic injury. Liver injury in mice was induced by intraperitoneal injection with 1% CCl4 (10 mL/kg/day). When the first dose was given, CCl4 was given immediately after administration of different doses of allicin (40, 20, and 10 mg/kg/day) as well as compound glycyrrhizin (CGI, 80 mg/kg/day), and then different doses of allicin (40, 20, and 10 mg/kg/day) as well as compound glycyrrhizin (CGI, 80 mg/kg/day) were administrated every 12 h. The animals were dissected 24 h after the first administration. The findings demonstrated a significant inhibition of CCl4-induced acute liver injury following allicin treatment. This inhibition was evidenced by notable reductions in serum levels of transaminases, specifically aspartate transaminase, along with mitigated histological damage to the liver. In this protective process, allicin plays the role of reducing the amounts or the expression levels of proinflammatory cytokines, IL-1β, IL-6. Furthermore, allicin recovered the activities of the antioxidant enzyme catalase (CAT) and reduced the production of malondialdehyde (MDA) in a dose-dependent manner, and also reduced liver Caspase 3, Caspase 8, and BAX to inhibit liver cell apoptosis. Further analysis showed that the administration of allicin inhibited the increased protein levels of Nuclear factor-erythroid 2-related factor 2 (Nrf2) and NAD(P)H:quinone oxidoreductase 1 (NQO1), which is related to inflammation and oxidative stress. The in vitro study of the LPS-induced RAW264.7 inflammatory cell model confirmed that allicin can inhibit important inflammation-related factors and alleviate inflammation. This research firstly clarified that allicin has a significant protective effect on CCl4-induced liver injury via inhibiting the inflammatory response and hepatocyte apoptosis, alleviating oxidative stress associated with the progress of liver damage, highlighting the potential of allicin as a hepatoprotective agent. Full article
(This article belongs to the Special Issue Research on Veterinary Toxicology)
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18 pages, 6372 KiB  
Article
Multi-Criteria Decision Analysis of an Innovative Additive Manufacturing Technique for Onboard Maintenance
by Ioannis Falkonakis, Saeid Lotfian and Baran Yeter
Sustainability 2024, 16(9), 3763; https://doi.org/10.3390/su16093763 (registering DOI) - 30 Apr 2024
Abstract
Access to spare parts in the maritime industry is limited throughout most of a ship’s life cycle. The limitation is caused by both the geographical distance of vessels from suppliers and the often limited turnaround time during which parts can be delivered. Manufacturing [...] Read more.
Access to spare parts in the maritime industry is limited throughout most of a ship’s life cycle. The limitation is caused by both the geographical distance of vessels from suppliers and the often limited turnaround time during which parts can be delivered. Manufacturing some parts onboard is possible, but it is a time-consuming and labour-intensive process. Advanced manufacturing techniques could be used to improve access to spare parts at sea by combining the desirable materials properties and flexibility of Direct Energy Deposition (DED) and the higher dimensional tolerances of Computer Numerical Control (CNC) manufacturing. The present study assesses the comparative viability of onboard implementation of advanced manufacturing techniques for offshore assets as a capital investment in different modes against an option of no onboard advanced manufacturing using a multi-criteria decision analysis method. To this end, a Technique to Order Preference by Similarity to Ideal Solution (TOPSIS) is employed considering the techno-economic and environmental aspects of the decision-making process as well as the inherent challenges that come with a new area of research. Finally, the challenges, opportunities, and pathways to onboard maintenance using additive manufacturing are discussed within the scope of the sustainable future for ship and offshore energy assets. Full article
(This article belongs to the Special Issue Sustainable Maritime Transportation)
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24 pages, 12805 KiB  
Article
Endurance Training Provokes Arrhythmogenic Right Ventricular Cardiomyopathy Phenotype in Heterozygous Desmoglein-2 Mutants: Alleviation by Preload Reduction
by Larissa Fabritz, Lisa Fortmueller, Katja Gehmlich, Sebastian Kant, Marcel Kemper, Dana Kucerova, Fahima Syeda, Cornelius Faber, Rudolf E. Leube, Paulus Kirchhof and Claudia A. Krusche
Biomedicines 2024, 12(5), 985; https://doi.org/10.3390/biomedicines12050985 (registering DOI) - 30 Apr 2024
Abstract
Desmoglein-2 mutations are detected in 5–10% of patients with arrhythmogenic right ventricular cardiomyopathy (ARVC). Endurance training accelerates the development of the ARVC phenotype, leading to earlier arrhythmic events. Homozygous Dsg2 mutant mice develop a severe ARVC-like phenotype. The phenotype of heterozygous mutant ( [...] Read more.
Desmoglein-2 mutations are detected in 5–10% of patients with arrhythmogenic right ventricular cardiomyopathy (ARVC). Endurance training accelerates the development of the ARVC phenotype, leading to earlier arrhythmic events. Homozygous Dsg2 mutant mice develop a severe ARVC-like phenotype. The phenotype of heterozygous mutant (Dsg2mt/wt) or haploinsufficient (Dsg20/wt) mice is still not well understood. To assess the effects of age and endurance swim training, we studied cardiac morphology and function in sedentary one-year-old Dsg2mt/wt and Dsg20/wt mice and in young Dsg2mt/wt mice exposed to endurance swim training. Cardiac structure was only occasionally affected in aged Dsg20/wt and Dsg2mt/wt mice manifesting as small fibrotic foci and displacement of Connexin 43. Endurance swim training increased the right ventricular (RV) diameter and decreased RV function in Dsg2mt/wt mice but not in wild types. Dsg2mt/wt hearts showed increased ventricular activation times and pacing-induced ventricular arrhythmia without obvious fibrosis or inflammation. Preload-reducing therapy during training prevented RV enlargement and alleviated the electrophysiological phenotype. Taken together, endurance swim training induced features of ARVC in young adult Dsg2mt/wt mice. Prolonged ventricular activation times in the hearts of trained Dsg2mt/wt mice are therefore a potential mechanism for increased arrhythmia risk. Preload-reducing therapy prevented training-induced ARVC phenotype pointing to beneficial treatment options in human patients. Full article
(This article belongs to the Special Issue Advanced Research in Arrhythmogenic Cardiomyopathy)
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22 pages, 8658 KiB  
Article
Insights into Wheat Genotype‒Sphaerodes mycoparasitica Interaction to Improve Crop Yield and Defence against Fusarium graminearum: An Integration of FHB Biocontrol in Canadian Wheat Breeding Programmes
by Antonia Powell, Seon Hwa Kim, Pierre Hucl and Vladimir Vujanovic
Pathogens 2024, 13(5), 372; https://doi.org/10.3390/pathogens13050372 (registering DOI) - 30 Apr 2024
Abstract
Fusarium head blight (FHB) is a major threat to wheat crop production and food security worldwide. The creation of resistant wheat cultivars is an essential component of an integrated strategy against Fusarium graminearum, the primary aetiological agent that causes FHB. The results [...] Read more.
Fusarium head blight (FHB) is a major threat to wheat crop production and food security worldwide. The creation of resistant wheat cultivars is an essential component of an integrated strategy against Fusarium graminearum, the primary aetiological agent that causes FHB. The results of this study show that the deployment of proto-cooperative interactions between wheat genotypes and mycoparasitic biocontrol agents (BCAs) can improve crop yield and plant resistance in controlling the devastating effects of FHB on wheat agronomic traits. A Fusarium-specific mycoparasite, Sphaerodes mycoparasitica, was found to be compatible with common and durum wheat hosts, thus allowing the efficient control of F. graminearum infection in plants. Four genotypes of wheat, two common wheat, and two durum wheat cultivars with varying FHB resistance levels were used in this greenhouse study. The BCA treatments decreased FHB symptoms in all four cultivars and improved the agronomic traits such as spike number, spike weight, seed weight, plant biomass, and plant height which are vital to grain yield. Conversely, the F. graminearum 3ADON chemotype treatment decreased the agronomic trait values by up to 44% across cultivars. Spike number, spike weight, and seed weight were the most improved traits by the BCA. A more measurable improvement in agronomic traits was observed in durum wheat cultivars compared to common wheat. Full article
(This article belongs to the Special Issue Current Research on Fusarium: 2nd Edition)
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18 pages, 2175 KiB  
Article
An NLOS Ranging Error Mitigation Method for 5G Positioning in Indoor Environments
by Jingrong Liu, Zhongliang Deng and Enwen Hu
Appl. Sci. 2024, 14(9), 3830; https://doi.org/10.3390/app14093830 (registering DOI) - 30 Apr 2024
Abstract
Positioning based on wireless signals such as mobile communication networks has become an important means to provide high-precision location services in environments where satellite signals are blocked. In complex environments such as indoors and underground, wireless signal propagation is obstructed and non-line-of-sight (NLOS) [...] Read more.
Positioning based on wireless signals such as mobile communication networks has become an important means to provide high-precision location services in environments where satellite signals are blocked. In complex environments such as indoors and underground, wireless signal propagation is obstructed and non-line-of-sight (NLOS) phenomena appear due to serious occlusion and reflection. The time delay caused by NLOS effects has little impact on communication system but can significantly increase positioning errors in positioning systems. Therefore, the effective suppression of NLOS errors is crucial to improving 5G positioning accuracy. To address the insufficient feature extraction of existing NLOS error suppression methods, the neglect of residual NLOS measurement errors, and poor stability of position estimation results, this paper innovatively proposes an NLOS mitigation and location estimation method for 5G positioning terminals. Simulation and experimental test results demonstrate that the proposed method outperforms the comparative methods both theoretically and practically, achieving an average positioning accuracy of 1.85 m in complex indoor NLOS environments. The method proposed in this paper provides a new strategy for NLOS error suppression in indoor 5G positioning, which can significantly contribute to high-precision location services based on commercial 5G networks. Full article
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