The 2023 MDPI Annual Report has
been released!
 
12 pages, 1084 KiB  
Article
Protocol for Evaluating Remote Patient Blood Pressure Monitoring Adapted to Black Women and Birthing Persons
by Loral Patchen, Asli McCullers, Serenity G. Budd, H. Joseph Blumenthal and W. Douglas Evans
Int. J. Environ. Res. Public Health 2024, 21(5), 603; https://doi.org/10.3390/ijerph21050603 (registering DOI) - 8 May 2024
Abstract
Cardiovascular disease is the leading cause of maternal death among Black women in the United States. A large, urban hospital adopted remote patient blood pressure monitoring (RBPM) to increase blood pressure monitoring and improve the management of hypertensive disorders of pregnancy (HDP) by [...] Read more.
Cardiovascular disease is the leading cause of maternal death among Black women in the United States. A large, urban hospital adopted remote patient blood pressure monitoring (RBPM) to increase blood pressure monitoring and improve the management of hypertensive disorders of pregnancy (HDP) by reducing the time to diagnosis of HDP. The digital platform integrates with the electronic health record (EHR), automatically inputting RBPM readings to the patients’ chart; communicating elevated blood pressure values to the healthcare team; and offers a partial offset of the cost through insurance plans. It also allows for customization of the blood pressure values that prompt follow-up to the patient’s risk category. This paper describes a protocol for evaluating its impact. Objective 1 is to measure the effect of the digitally supported RBPM on the time to diagnosis of HDP. Objective 2 is to test the effect of cultural tailoring to Black participants. The ability to tailor digital content provides the opportunity to test the added value of promoting social identification with the intervention, which may help achieve equity in severe maternal morbidity events related to HDP. Evaluation of this intervention will contribute to the growing literature on digital health interventions to improve maternity care in the United States. Full article
(This article belongs to the Special Issue The 20th Anniversary of IJERPH)
1 pages, 143 KiB  
Editorial
Statement of Peer Review
by David Arditi
Eng. Proc. 2023, 53(1), 59; https://doi.org/10.3390/engproc2023053059 - 8 May 2024
Abstract
In submitting conference proceedings to Engineering Proceedings, the volume editors of the proceedings certify to the publisher that all papers published in this volume have been subjected to peer review administered by the volume editors [...] Full article
(This article belongs to the Proceedings of The 1st International Online Conference on Buildings)
20 pages, 2038 KiB  
Article
Simulation of Indexing and Clocking with a New Multidimensional Time Harmonic Balance Approach
by Laura Junge, Christian Frey, Graham Ashcroft and Edmund Kügeler
Int. J. Turbomach. Propuls. Power 2024, 9(2), 17; https://doi.org/10.3390/ijtpp9020017 (registering DOI) - 8 May 2024
Abstract
Alongside the capability to simulate rotor–stator interactions, a central aspect within the development of frequency-domain methods for turbomachinery flows is the ability of the method to accurately predict rotor–rotor and stator–stator interactions on a single-passage domain. To simulate such interactions, state-of-the-art frequency-domain approaches [...] Read more.
Alongside the capability to simulate rotor–stator interactions, a central aspect within the development of frequency-domain methods for turbomachinery flows is the ability of the method to accurately predict rotor–rotor and stator–stator interactions on a single-passage domain. To simulate such interactions, state-of-the-art frequency-domain approaches require one fundamental interblade phase angle, and therefore it can be necessary to resort to multi-passage configurations. Other approaches neglect the cross-coupling of different harmonics. As a consequence, the influence of indexing on the propagation of the unsteady disturbances is not captured. To overcome these issues, the harmonic balance approach based on multidimensional Fourier transforms in time, recently introduced by the authors, is extended in this work to account for arbitrary interblade phase angle ratios on a single-passage domain. To assess the ability of the approach to simulate the influence of indexing on the steady, as well as on the unsteady, part of the flow, the proposed extension is applied to a modern low-pressure fan stage of a civil aero engine under the influence of an inhomogeneous inflow condition. The results are compared to unsteady simulations in the time-domain and to state-of-the-art frequency-domain methods based on one-dimensional discrete Fourier transforms. Full article
Show Figures

Figure 1

11 pages, 3138 KiB  
Article
A Current Design Approach for Ming Chairs
by Yifan Bai, Khairul Manami Kamarudin and Hassan Alli
Designs 2024, 8(3), 42; https://doi.org/10.3390/designs8030042 (registering DOI) - 8 May 2024
Abstract
Ergonomics are key in the design and application of Ming-style chairs. However, there are presently few specific design frameworks to guide Ming-style chair design. Under this background, the present study developed a questionnaire on the ergonomic design of Ming-style chairs and assessed its [...] Read more.
Ergonomics are key in the design and application of Ming-style chairs. However, there are presently few specific design frameworks to guide Ming-style chair design. Under this background, the present study developed a questionnaire on the ergonomic design of Ming-style chairs and assessed its validity and reliability. Fifty-two respondents involved in the design and manufacture of Ming-style chairs participated in this study. The statistics of the questionnaire were analyzed and yielded a significant reliability coefficient (α > 0.70, p < 0.01). This ergonomic design framework study of Ming-style chairs analyzed the domains of Chair Form, Aesthetics, Safety, Comfort, Ease-of-use, and Productivity. To assess the importance of various design elements, we used a five-point Likert scale to score items within each domain. This scoring system enabled us to prioritize features, allowing the designers to focus on the essential elements before beginning the design process. We found that designers and manufacturers focused primarily on the Four-headed Official Chair with Armrests form. Full article
Show Figures

Figure 1

10 pages, 199 KiB  
Commentary
‘I Am a Broken Policy’: A Critical Reflection on Whiteness and Gender Anti-Black Racism in Institutions of Higher Education and Social Services
by Tiffany N. Younger
Genealogy 2024, 8(2), 52; https://doi.org/10.3390/genealogy8020052 (registering DOI) - 8 May 2024
Abstract
This personal narrative is a critical reflection and affirmation letter to Black women. Throughout this commentary, at the end of each section, I have included what I call “gems”. I hope they serve as a manifesto for our collective healing from working in [...] Read more.
This personal narrative is a critical reflection and affirmation letter to Black women. Throughout this commentary, at the end of each section, I have included what I call “gems”. I hope they serve as a manifesto for our collective healing from working in institutions that center on the ideologies and practices of dominance. This piece particularly focuses on the dominant ideology and practice of “whiteness” within institutions as a surveillance tool through policy that directly impacts Black women’s wellbeing through gender anti-black racism. Through storytelling and drawing on Black feminist scholarship, this narrative exposes the challenges I faced with institutional policies and practices as I pursued my career in both academia and social service work. Throughout this narrative, I highlight how the undercurrent of whiteness is embedded in the foundation of institutional policy and practices. This narrative serves as a demand for institutional accountability and reckoning with the coloniality of epistemology and ontology. There is a great emotional toll for Black women who are confronting and resisting gendered anti-black racism with deep internal struggles and triumphs. The violent institutional practices seek to eclipse Black women’s ability to dream, imagine and create. Whiteness is centered in institutional infrastructure, serves as a distraction, and impedes our ability to conceptualize the world we desire. We deserve to have imagination in our work. This narrative is a reflection of the harm of whiteness, a guide for Black women academics, a manifesto for change, and a testament to our humanity. Full article
23 pages, 1420 KiB  
Article
Phenolic Compounds of Six Unexplored Asteraceae Species from Asia: Comparison of Wild and Cultivated Plants
by Daniil N. Olennikov and Nadezhda K. Chirikova
Horticulturae 2024, 10(5), 486; https://doi.org/10.3390/horticulturae10050486 (registering DOI) - 8 May 2024
Abstract
The Asteraceae family in Siberian Asia exhibits remarkable biodiversity and has long served as a valuable resource for domesticating various beneficial plants with medicinal, therapeutic, and industrial significance to humanity. In this work, we studied for the first time the chemical composition of [...] Read more.
The Asteraceae family in Siberian Asia exhibits remarkable biodiversity and has long served as a valuable resource for domesticating various beneficial plants with medicinal, therapeutic, and industrial significance to humanity. In this work, we studied for the first time the chemical composition of six understudied or previously unexplored plant species, Artemisia jacutica (AJ), Carduus nutans subsp. leiophyllus (CL), Cirsium heterophyllum (CH), Echinops davuricus (ED), Ixeris chinensis subsp. versicolor (IV), and Lactuca sibirica (LS), which were successfully cultivated under open-field conditions as biennial or perennial crops. We profiled these species, employing a liquid chromatography–mass spectrometry approach, identifying over 100 phenolic compounds. Among these compounds were hydroxybenzoic acid glucosides, hydroxybenzoyl/p-coumaroyl/feruloyl quinic acids, hydroxycoumarin O-glucosides, caffeoyl/p-coumaroyl/feruloyl glucaric/tartaric acids, O- and C-glucosides of apigenin, acacetin, luteolin, chrysoeriol, 6-hydroxyluteolin, pectolinarigenin, kaempferol, quercetin, isorhamnetin, and tri-/tetra-O-p-coumaroyl spermines and spermidines. All examined species exhibited a significant accumulation of phenolic compounds throughout the experimental period, reaching levels comparable to or exceeding those found in wild samples (WSs), with the best total phenolic content for AJ at 26.68 mg/g (vs. 26.68 mg/g in WS; second year), CL at 50.23 mg/g (vs. 38.32 mg/g in WS; second year), CH at 51.14 mg/g (vs. 40.86 mg/g in WS; sixth year), ED at 86.12 mg/g (vs. 78.08 mg/g in WS; seventh year), IV at 102.49 mg/g (vs. 88.58 mg/g in WS; fourth year), and LS at 127.34 mg/g (vs. 110.64 mg/g in WS; fifth year). Notably, in the first year of cultivation, approximately 40–60% of the wild-level target compounds accumulated in the plants, with even higher levels detected in subsequent years, particularly in the second and third years. This study highlights the potential of cultivation to produce new Asteraceae plants rich in bioactive phenolics. Full article
Show Figures

Figure 1

8 pages, 440 KiB  
Commentary
Methodological Considerations Regarding the Quantification of DNA Impurities in the COVID-19 mRNA Vaccine Comirnaty®
by Brigitte König and Jürgen O. Kirchner
Methods Protoc. 2024, 7(3), 41; https://doi.org/10.3390/mps7030041 (registering DOI) - 8 May 2024
Abstract
DNA impurities can impact the safety of genetically engineered pharmaceuticals; thus, a specific limit value must be set for them during marketing authorisation. This particularly applies to mRNA vaccines, as large quantities of DNA templates are used for their production. Furthermore, when quantifying [...] Read more.
DNA impurities can impact the safety of genetically engineered pharmaceuticals; thus, a specific limit value must be set for them during marketing authorisation. This particularly applies to mRNA vaccines, as large quantities of DNA templates are used for their production. Furthermore, when quantifying the total DNA content in the final product, we must observe that, in addition to the mRNA active ingredient, DNA impurities are also encased in lipid nanoparticles and are therefore difficult to quantify. In fact, the manufacturer of the mRNA vaccine Comirnaty (BioNTech/Pfizer) only measures DNA impurities in the active substance by means of a quantitative polymerase chain reaction (qPCR), whose DNA target sequence is less than just 1% of the originally added DNA template. This means that no direct DNA quantification takes place, and compliance with the limit value for DNA contamination is only estimated from the qPCR data using mathematical extrapolation methods. However, it is also possible to dissolve the lipid nanoparticles with a detergent to directly measure DNA contamination in the final product by using fluorescence spectroscopic methods. Experimental testing of this approach confirms that reliable values can be obtained in this way. Full article
(This article belongs to the Section Biomedical Sciences and Physiology)
20 pages, 2601 KiB  
Article
Reducing Artisanal Fishery Impact on Marine Community: New Data from Comparison of Innovative and Traditional Gear
by Manfredi Madia, Massimiliano Bottaro, Tiziana Cillari, Andrea Li Vorsi, Luca Castriota, Maria Rita Amico, Sergio Bizzarri, Teresa Maggio, Manuela Falautano, Michele Gristina, Ilaria Di Lauro, Floriana Trova, Patrizia Perzia, Roberto D’Ambra, Enrico Casola and Mauro Sinopoli
Fishes 2024, 9(5), 171; https://doi.org/10.3390/fishes9050171 (registering DOI) - 8 May 2024
Abstract
Fishery resources overexploitation, together with bycatch and discards, have an impact on marine ecosystems. The adoption of technologically innovative gears is a possible solution to reduce the discard and to enhance the sustainability of fishery, mainly in artisanal fisheries that represent about 80% [...] Read more.
Fishery resources overexploitation, together with bycatch and discards, have an impact on marine ecosystems. The adoption of technologically innovative gears is a possible solution to reduce the discard and to enhance the sustainability of fishery, mainly in artisanal fisheries that represent about 80% of the EU Mediterranean fleet. In the perspective of fishery sustainability, it is necessary to study and test alternative gears to the traditional ones, also with collaboration of fishers. In the present study, results of experimental fishing activities carried out in two Mediterranean areas with traditional and innovative gears of small-scale fishing are reported. Thirty-four hauls were carried out to compare the catch of two types of trammel nets: a traditional one and experimental guarding net. Additionally, 12 hauls were carried out to compare collapsible pots and traditional pots. No significant differences were recorded between trammel nets in terms of commercial catch and discard. However, interesting differences in discard composition were recorded, with higher Elasmobranchs presence in trammel nets, including species assessed as critically endangered and vulnerable. The use of trapula pots in place of traditional ones showed a lower discard of specific resources and an advantage for fishers in terms of space occupied on board. Full article
(This article belongs to the Section Fishery Facilities, Equipment, and Information Technology)
11 pages, 1266 KiB  
Article
The Optimum Substrate Moisture Level to Enhance the Growth and Quality of Arugula (Eruca sativa)
by Kiram Lee, Seong Kwang An, Kang-Mo Ku and Jongyun Kim
Horticulturae 2024, 10(5), 483; https://doi.org/10.3390/horticulturae10050483 (registering DOI) - 8 May 2024
Abstract
Arugula (Eruca sativa Mill.) is a nutritious vegetable, commonly used in salads, known for its high glucosinolate content and various health benefits and flavors. However, arugulas may contain -excessive nitrate levels, potentially harmful to human health. We aimed to examine the effect [...] Read more.
Arugula (Eruca sativa Mill.) is a nutritious vegetable, commonly used in salads, known for its high glucosinolate content and various health benefits and flavors. However, arugulas may contain -excessive nitrate levels, potentially harmful to human health. We aimed to examine the effect of substrate moisture levels on the growth and quality of arugula under controlled irrigation conditions to investigate a proper irrigation practice for the quality production of arugula. The plants were cultivated using a sensor-based automated irrigation system to maintain the substrate volumetric water content (VWC) levels at 0.20, 0.30, 0.40, and 0.50 m3·m−3 over three weeks (vegetative stage). The treatment with VWC of 0.20 m3·m−3 resulted in reduced shoot growth, primarily attributed to drought-induced constraints on leaf expansion. Despite the initial reductions in stomatal conductance in arugulas subjected to lower VWC treatments, they eventually recovered and exhibited similar stomatal conductance levels across all VWC treatments 15 days after treatment, indicating acclimation to drought stress. The VWC treatment did not affect the nitrate and total glucosinolate contents of arugula, except for a decrease in glucoerucin content observed in the lowest VWC treatment. Maintaining a VWC level at 0.20 m3·m−3 could impair both the growth and quality of arugula due to severe drought conditions. Alternatively, maintaining the VWC at 0.30 m3·m−3 would ensure a high water use efficiency while securing the growth and quality of arugula. Full article
Show Figures

Figure 1

14 pages, 1506 KiB  
Article
A Microactuator Array Based on Ionic Electroactive Artificial Muscles for Cell Mechanical Stimulation
by Jing Gu, Zixing Zhou, Yang Xie, Xiaobin Zhu, Guoyou Huang and Zuoqi Zhang
Biomimetics 2024, 9(5), 281; https://doi.org/10.3390/biomimetics9050281 (registering DOI) - 8 May 2024
Abstract
Mechanical stimulation is prevalent within organisms, and appropriate regulation of such stimulation can significantly enhance cellular functions. Consequently, the in vitro construction and simulation of mechanical stimulation have emerged as a research hotspot in biomechanics. In recent years, a class of artificial muscles [...] Read more.
Mechanical stimulation is prevalent within organisms, and appropriate regulation of such stimulation can significantly enhance cellular functions. Consequently, the in vitro construction and simulation of mechanical stimulation have emerged as a research hotspot in biomechanics. In recent years, a class of artificial muscles named electroactive polymers (EAPs), especially ionic EAPs, have shown promising applications in biomechanics. While several techniques utilizing ionic EAPs for cell mechanical stimulation have been reported, further research is needed to advance and enhance their practical applications. Here, we prepared a microactuator array based on ionic EAP artificial muscles for cell mechanical stimulation. As a preliminary effort, we created a 5 × 5 microactuator array on a supporting membrane by employing laser cutting. We evaluated the electro-actuation performance of the microactuators through experimental testing and numerical simulations, affirming the potential use of the microactuator array for cell mechanical stimulation. The devised approach could inspire innovative design concepts in the development of miniaturized intelligent electronic devices, not only in biomechanics and biomimetics but also in other related fields. Full article
(This article belongs to the Special Issue Biomechanics and Biomimetics in Engineering Design)
13 pages, 1866 KiB  
Communication
N-Acetylglutamic Acid Enhances Tolerance to Oxidative and Heat Stress in Humulus lupulus
by Takeshi Hirakawa and Kazuaki Ohara
Horticulturae 2024, 10(5), 484; https://doi.org/10.3390/horticulturae10050484 (registering DOI) - 8 May 2024
Abstract
Humulus lupulus (hop) is a necessary material in beer brewing because its female inflorescences (called hop cones) give a floral aroma, bitterness and foam stability to beer. Various aspects of growth conditions in the cultivation area, especially temperature, strongly affect the yield and [...] Read more.
Humulus lupulus (hop) is a necessary material in beer brewing because its female inflorescences (called hop cones) give a floral aroma, bitterness and foam stability to beer. Various aspects of growth conditions in the cultivation area, especially temperature, strongly affect the yield and quality of hop cones. Recent estimates suggest that climate change accompanied by global warming is negatively impacting hop production, with high temperatures reducing the expression of genes that regulate beneficial secondary metabolites in hops. This underscores the need for techniques to enhance hop tolerance to high temperatures. This study explores the potential of N-acectylglutamic acid (NAG), a non-proteinogenic amino acid, to confer hops with tolerance against oxidative and heat stress by suppressing ROS accumulation. Exogenous NAG treatment activated the expression of HlZAT10/12 and HlHSFA2, which are putative homologues considered master regulators in response to oxidative and heat stress in Arabidopsis thaliana (Arabidopsis). Additionally, histone acetylation, a histone modification associated with transcriptional activation, was increased at these stress-responsive genes in the NAG-treated hops. These findings reveal NAG as a potential chemical compound to mitigate hop production reduction caused by high temperatures and suggest the conservation of epigenetic modification-mediated regulation of gene expression in response to environmental stresses in hops. Full article
Show Figures

Figure 1

9 pages, 1246 KiB  
Article
A Morphometric Study of the Pars Plana of the Ciliary Body in Human Cadaver Eyes
by Jaime Guedes, Bruno F. Fernandes, Denisse J. Mora-Paez, Rodrigo Brazuna, Alexandre Batista da Costa Neto, Dillan Cunha Amaral, Adriano Cypriano Faneli, Ricardo Danilo Chagas Oliveira, Adroaldo de Alencar Costa Filho and Adalmir Morterá Dantas
Vision 2024, 8(2), 30; https://doi.org/10.3390/vision8020030 (registering DOI) - 8 May 2024
Abstract
This study aimed to determine the pars plana length in postmortem human eyes using advanced morphometric techniques and correlate demographics to ocular metrics such as age, sex, ethnicity, and axial length. Between February and July 2005, we conducted a cross-sectional observational study on [...] Read more.
This study aimed to determine the pars plana length in postmortem human eyes using advanced morphometric techniques and correlate demographics to ocular metrics such as age, sex, ethnicity, and axial length. Between February and July 2005, we conducted a cross-sectional observational study on 46 human cadaver eyes deemed unsuitable for transplant by the SBO Eye Bank. The morphometric analysis was performed on projected images using a surgical microscope and a video-microscopy system with a 20.5:1 correction factor. The pars plana length was measured three times per quadrant, with the final value being the mean of these measurements. Of the 46 eyes collected, 9 were unsuitable for the study due to technical constraints in conducting intraocular measurements. Overall, the average axial length was 25.20 mm. The average pars plana length was 3.8 mm in all quadrants, with no measurements below 2.8 mm or above 4.9 mm. There were no statistically significant variations across quadrants or with age, sex, axial length, or laterality. Accurately defining the pars plana dimensions is crucial for safely accessing the posterior segment of the eye and minimizing complications during intraocular procedures, such as intravitreal injections and vitreoretinal surgeries. Full article
Show Figures

Figure 1

17 pages, 9638 KiB  
Article
A Preliminary Study on the Identification of Genes Involved in Lignification in the Endocarp of Bared-Nut Walnut (Juglans regia L.) in Xinjiang, China
by Shangqi Yu, Jiazhi Fu, Qian Ye, Pengyu Wu, Jianping Bao, Haifang Hu, Zhongzhong Guo, Rui Zhang and Qiang Jin
Horticulturae 2024, 10(5), 487; https://doi.org/10.3390/horticulturae10050487 (registering DOI) - 8 May 2024
Abstract
This study focused on the “Xinlu” walnut and explored the molecular regulatory mechanism of lignin synthesis in the endocarp, aiming to explain the formation of bared-nut walnuts through morphological, metabolomic, and transcriptomic techniques. It was found that the synthesis of lignin, cellulose, p-coumaryl [...] Read more.
This study focused on the “Xinlu” walnut and explored the molecular regulatory mechanism of lignin synthesis in the endocarp, aiming to explain the formation of bared-nut walnuts through morphological, metabolomic, and transcriptomic techniques. It was found that the synthesis of lignin, cellulose, p-coumaryl alcohol, and sinapyl alcohol was severely inhibited in the pulpy-hue (PUH) of the endocarp. We obtained 14 modules (gene sets) significantly correlated with the lignification factor (LIG) and 1548 hub genes. Additionally, we identified a MEplum3 module involved in endocarp lignin synthesis, primarily participating in phenylalanine biosynthesis and the lignin biosynthetic process. Meanwhile, we constructed a gene co-expression network for the MEplum3 module and identified a key hub gene for lignin synthesis—JrCAD10. Among the different tissues of “Xinlu”, the expression level of JrCAD10 in the scleritic-hue (SCH) was significantly higher than in other tissues, with a relative copy number (RCN) of 3.2. However, JrCAD10 expression was severely suppressed in the PUH. The suppression of JrCAD10 expression led to the inhibition of lignin monomer synthesis, which further resulted in inhibited lignin synthesis, thus forming the bared-nut walnut. Our findings provide new insights into understanding the regulation of lignin synthesis and offer a possible explanation for the formation of bared-nut walnuts. Full article
(This article belongs to the Collection New Insights into Developmental Biology of Fruit Trees)
Show Figures

Figure 1

16 pages, 3594 KiB  
Article
Effect of Biotic Stress Due to Phyllophaga spp. on Antioxidant Compounds during Jicama Root (Pachyrhizus erosus) Development
by Verónica Cuellar-Sánchez, José Honorato Arreguín-Centeno, Marcela González-Vázquez, Ma. de la Paz Salgado-Cruz, Reynold R. Farrera-Rebollo, Gustavo F. Gutiérrez-López and Georgina Calderón-Domínguez
Horticulturae 2024, 10(5), 485; https://doi.org/10.3390/horticulturae10050485 (registering DOI) - 8 May 2024
Abstract
The levels of different nutraceutical metabolites present in the jicama root were measured when subjecting the plant to induced biotic stress via infestation with Phyllophaga spp. (white grubs). The change in secondary metabolites on the stressed jicama roots (SJ), mostly antioxidants, was followed [...] Read more.
The levels of different nutraceutical metabolites present in the jicama root were measured when subjecting the plant to induced biotic stress via infestation with Phyllophaga spp. (white grubs). The change in secondary metabolites on the stressed jicama roots (SJ), mostly antioxidants, was followed over 100, 140, and 180 days and compared against the non-infested control jicama (CJ). Our results show that infested (SJ) samples contained higher concentrations of tannins, flavonoids, and total phenols, measured using spectrophotometric methods, peaking at 140 days, and higher overall concentration of saponins. SJ samples showed higher DPPH inhibition, peaking at 100 days. Chlorogenic acid had the highest concentration among the phenolic compounds (7.47 mg g−1), followed by protocatechuic acid, both in SJ, which was possibly related to the lower observed concentrations of caffeic and ferulic acids. As for flavonoids, we observed a high concentration of rutin in CJ and a low concentration of pelargonidin and myricetin in SJ, possibly promoted via the dihydrokaempferol pathway. Taken together, these results show that Phyllophaga spp.-mediated biotic stress affects the concentrations of secondary metabolites in the different maturity stages in jicama, having an effect on its metabolic pathways, which presents an opportunity for the use of material such as agro-industrial waste. Full article
(This article belongs to the Section Plant Pathology and Disease Management (PPDM))
Show Figures

Figure 1

20 pages, 1088 KiB  
Article
The Pathologically Evolving Aggregation-State of Cells in Cancerous Tissues as Interpreted by Fractal and Multi-Fractal Dispersion Theory in Saturated Porous Formations
by Marilena Pannone
Bioengineering 2024, 11(5), 469; https://doi.org/10.3390/bioengineering11050469 (registering DOI) - 8 May 2024
Abstract
A recent author’s fractal fluid-dynamic dispersion theory in porous media has focused on the derivation of the associated nonergodic (or effective) macrodispersion coefficients by a 3-D stochastic Lagrangian approach. As shown by the present study, the Fickian (i.e., the asymptotic constant) component of [...] Read more.
A recent author’s fractal fluid-dynamic dispersion theory in porous media has focused on the derivation of the associated nonergodic (or effective) macrodispersion coefficients by a 3-D stochastic Lagrangian approach. As shown by the present study, the Fickian (i.e., the asymptotic constant) component of a properly normalized version of these coefficients exhibits a clearly detectable minimum in correspondence with the same fractal dimension (d ≅ 1.7) that seems to characterize the diffusion-limited aggregation state of cells in advanced stages of cancerous lesion progression. That circumstance suggests that such a critical fractal dimension, which is also reminiscent of the colloidal state of solutions (and may therefore identify the microscale architecture of both living and non-living two-phase systems in state transition conditions) may actually represent a sort of universal nature imprint. Additionally, it suggests that the closed-form analytical solution that was provided for the effective macrodispersion coefficients in fractal porous media may be a reliable candidate as a physically-based descriptor of blood perfusion dynamics in healthy as well as cancerous tissues. In order to evaluate the biological meaningfulness of this specific fluid-dynamic parameter, a preliminary validation is performed by comparison with the results of imaging-based clinical surveys. Moreover, a multifractal extension of the theory is proposed and discussed in view of a perspective interpretative diagnostic utilization. Full article
Show Figures

Graphical abstract

20 pages, 6561 KiB  
Article
Arbuscular Mycorrhizal Fungi Diversity in Sophora japonica Rhizosphere at Different Altitudes and Lithologies
by Limin Yu, Zhongfeng Zhang, Peiyuan Liu, Longwu Zhou, Shuhui Tan and Shitou Kuang
J. Fungi 2024, 10(5), 340; https://doi.org/10.3390/jof10050340 (registering DOI) - 8 May 2024
Abstract
Arbuscular mycorrhizal fungi play a key role in mediating soil–plant relationships within karst ecosystems. Sophora japonica, a medicinal plant with anti-inflammatory and antitumor properties, is widely cultivated in karst areas of Guangxi, China. We considered limestone, dolomite, and sandstone at altitudes ranging [...] Read more.
Arbuscular mycorrhizal fungi play a key role in mediating soil–plant relationships within karst ecosystems. Sophora japonica, a medicinal plant with anti-inflammatory and antitumor properties, is widely cultivated in karst areas of Guangxi, China. We considered limestone, dolomite, and sandstone at altitudes ranging from 100 to 800 m and employed Illumina sequencing to evaluate AMF diversity and identify the factors driving S. japonica rhizosphere AMF community changes. We showed that the increase in altitude increased S. japonica AMF colonization and the Shannon index. The colonization of limestone plots was higher than that of other lithology. In total, 3,096,236 sequences and 5767 OTUs were identified in S. japonica rhizosphere soil. Among these, 270 OTUs were defined at the genus level and divided into 7 genera and 35 species. Moreover, available nitrogen, soil organic matter, and available calcium content had a coupling effect and positive influence on AMF colonization and Shannon and Chao1 indices. Conversely, available phosphorus, available potassium, and available magnesium negatively affected AMF Shannon and Chao1 indices. Lithology, altitude, pH, and available phosphorus are important factors that affect the dynamics of AMF in the S. japonica rhizosphere. Full article
(This article belongs to the Special Issue Symbiosis of Mycorrhizal Fungi and Plants)
Show Figures

Figure 1

23 pages, 2398 KiB  
Article
Lightweight Low-Rank Adaptation Vision Transformer Framework for Cervical Cancer Detection and Cervix Type Classification
by Zhenchen Hong, Jingwei Xiong, Han Yang and Yu K. Mo
Bioengineering 2024, 11(5), 468; https://doi.org/10.3390/bioengineering11050468 (registering DOI) - 8 May 2024
Abstract
Cervical cancer is a major health concern worldwide, highlighting the urgent need for better early detection methods to improve outcomes for patients. In this study, we present a novel digital pathology classification approach that combines Low-Rank Adaptation (LoRA) with the Vision Transformer (ViT) [...] Read more.
Cervical cancer is a major health concern worldwide, highlighting the urgent need for better early detection methods to improve outcomes for patients. In this study, we present a novel digital pathology classification approach that combines Low-Rank Adaptation (LoRA) with the Vision Transformer (ViT) model. This method is aimed at making cervix type classification more efficient through a deep learning classifier that does not require as much data. The key innovation is the use of LoRA, which allows for the effective training of the model with smaller datasets, making the most of the ability of ViT to represent visual information. This approach performs better than traditional Convolutional Neural Network (CNN) models, including Residual Networks (ResNets), especially when it comes to performance and the ability to generalize in situations where data are limited. Through thorough experiments and analysis on various dataset sizes, we found that our more streamlined classifier is highly accurate in spotting various cervical anomalies across several cases. This work advances the development of sophisticated computer-aided diagnostic systems, facilitating more rapid and accurate detection of cervical cancer, thereby significantly enhancing patient care outcomes. Full article
(This article belongs to the Special Issue Mathematical and Computational Modeling of Cancer Progression)
Show Figures

Figure 1

17 pages, 4166 KiB  
Article
Morphology and Composition of Lumbar Intervertebral Discs: Comparative Analyses of Manual Measurement and Computer-Assisted Algorithms
by Yiting Cheng, Yuyan Ma, Kang Li, Celal Gungor, Richard Sesek and Ruoliang Tang
Bioengineering 2024, 11(5), 466; https://doi.org/10.3390/bioengineering11050466 (registering DOI) - 8 May 2024
Abstract
Background: The morphology and internal composition, particularly the nucleus-to-cross sectional area (NP-to-CSA) ratio of the lumbar intervertebral discs (IVDs), is important information for finite element models (FEMs) of spinal loadings and biomechanical behaviors, and, yet, this has not been well investigated and reported. [...] Read more.
Background: The morphology and internal composition, particularly the nucleus-to-cross sectional area (NP-to-CSA) ratio of the lumbar intervertebral discs (IVDs), is important information for finite element models (FEMs) of spinal loadings and biomechanical behaviors, and, yet, this has not been well investigated and reported. Methods: Anonymized MRI scans were retrieved from a previously established database, including a total of 400 lumbar IVDs from 123 subjects (58 F and 65 M). Measurements were conducted manually by a spine surgeon and using two computer-assisted segmentation algorithms, i.e., fuzzy C-means (FCM) and region growing (RG). The respective results were compared. The influence of gender and spinal level was also investigated. Results: Ratios derived from manual measurements and the two computer-assisted algorithms (FCM and RG) were 46%, 39%, and 38%, respectively. Ratios derived manually were significantly larger. Conclusions: Computer-assisted methods provide reliable outcomes that are traditionally difficult for the manual measurement of internal composition. FEMs should consider the variability of NP-to-CSA ratios when studying the biomechanical behavior of the spine. Full article
(This article belongs to the Section Biosignal Processing)
Show Figures

Figure 1

19 pages, 2276 KiB  
Article
Central Carbon Metabolism in Candida albicans Biofilms Is Altered by Dimethyl Sulfoxide
by Maria Fernanda Cordeiro Arruda, Romeu Cassiano Pucci da Silva Ramos, Nicoly Subtil de Oliveira, Rosimeire Takaki Rosa, Patrícia Maria Stuelp-Campelo, Luiz Fernando Bianchini, Silas Granato Villas-Bôas and Edvaldo Antonio Ribeiro Rosa
J. Fungi 2024, 10(5), 337; https://doi.org/10.3390/jof10050337 (registering DOI) - 8 May 2024
Abstract
The effect of dimethyl sulfoxide (DMSO) on fungal metabolism has not been well studied. This study aimed to evaluate, by metabolomics, the impact of DMSO on the central carbon metabolism of Candida albicans. Biofilms of C. albicans SC5314 were grown on paper [...] Read more.
The effect of dimethyl sulfoxide (DMSO) on fungal metabolism has not been well studied. This study aimed to evaluate, by metabolomics, the impact of DMSO on the central carbon metabolism of Candida albicans. Biofilms of C. albicans SC5314 were grown on paper discs, using minimum mineral (MM) medium, in a dynamic continuous flow system. The two experimental conditions were control and 0.03% DMSO (v/v). After 72 h of incubation (37 °C), the biofilms were collected and the metabolites were extracted. The extracted metabolites were subjected to gas chromatography–mass spectrometry (GC/MS). The experiment was conducted using five replicates on three independent occasions. The GC/MS analysis identified 88 compounds. Among the 88 compounds, the levels of 27 compounds were markedly different between the two groups. The DMSO group exhibited enhanced levels of putrescine and glutathione and decreased levels of methionine and lysine. Additionally, the DMSO group exhibited alterations in 13 metabolic pathways involved in primary and secondary cellular metabolism. Among the 13 altered pathways, seven were downregulated and six were upregulated in the DMSO group. These results indicated a differential intracellular metabolic profile between the untreated and DMSO-treated biofilms. Hence, DMSO was demonstrated to affect the metabolic pathways of C. albicans. These results suggest that DMSO may influence the results of laboratory tests when it is used as a solvent. Hence, the use of DMSO as a solvent must be carefully considered in drug research, as the effect of the researched drugs may not be reliably translated into clinical practice. Full article
(This article belongs to the Special Issue Fungal Biofilms, 2nd Edition)
Show Figures

Figure 1

18 pages, 2273 KiB  
Article
Closed-Loop Transcranial Electrical Neurostimulation for Sustained Attention Enhancement: A Pilot Study towards Personalized Intervention Strategies
by Emma Caravati, Federica Barbeni, Giovanni Chiarion, Matteo Raggi and Luca Mesin
Bioengineering 2024, 11(5), 467; https://doi.org/10.3390/bioengineering11050467 (registering DOI) - 8 May 2024
Abstract
Sustained attention is pivotal for tasks like studying and working for which focus and low distractions are necessary for peak productivity. This study explores the effectiveness of adaptive transcranial direct current stimulation (tDCS) in either the frontal or parietal region to enhance sustained [...] Read more.
Sustained attention is pivotal for tasks like studying and working for which focus and low distractions are necessary for peak productivity. This study explores the effectiveness of adaptive transcranial direct current stimulation (tDCS) in either the frontal or parietal region to enhance sustained attention. The research involved ten healthy university students performing the Continuous Performance Task-AX (AX-CPT) while receiving either frontal or parietal tDCS. The study comprised three phases. First, we acquired the electroencephalography (EEG) signal to identify the most suitable metrics related to attention states. Among different spectral and complexity metrics computed on 3 s epochs of EEG, the Fuzzy Entropy and Multiscale Sample Entropy Index of frontal channels were selected. Secondly, we assessed how tDCS at a fixed 1.0 mA current affects attentional performance. Finally, a real-time experiment involving continuous metric monitoring allowed personalized dynamic optimization of the current amplitude and stimulation site (frontal or parietal). The findings reveal statistically significant improvements in mean accuracy (94.04 vs. 90.82%) and reaction times (262.93 vs. 302.03 ms) with the adaptive tDCS compared to a non-stimulation condition. Average reaction times were statistically shorter during adaptive stimulation compared to a fixed current amplitude condition (262.93 vs. 283.56 ms), while mean accuracy stayed similar (94.04 vs. 93.36%, improvement not statistically significant). Despite the limited number of subjects, this work points out the promising potential of adaptive tDCS as a tailored treatment for enhancing sustained attention. Full article
(This article belongs to the Special Issue Adaptive Neurostimulation: Innovative Strategies for Stimulation)
Show Figures

Graphical abstract

20 pages, 6852 KiB  
Article
Inhibition of Microbicidal Activity of Canine Macrophages DH82 Cell Line by Capsular Polysaccharides from Cryptococcus neoformans
by Isabel F. LaRocque-de-Freitas, Elias Barbosa da Silva-Junior, Leticia Paixão Gemieski, Beatriz da Silva Dias Lima, Israel Diniz-Lima, Aislan de Carvalho Vivarini, Ulisses G. Lopes, Leonardo Freire-de-Lima, Alexandre Morrot, José Osvaldo Previato, Lucia Mendonça-Previato, Lucia Helena Pinto-da-Silva, Celio G. Freire-de-Lima and Debora Decote-Ricardo
J. Fungi 2024, 10(5), 339; https://doi.org/10.3390/jof10050339 (registering DOI) - 8 May 2024
Abstract
Cryptococcus neoformans is a lethal fungus that primarily affects the respiratory system and the central nervous system. One of the main virulence factors is the capsule, constituted by the polysaccharides glucuronoxylomannan (GXM) and glucuronoxylomanogalactan (GXMGal). Polysaccharides are immunomodulators. One of the target cell [...] Read more.
Cryptococcus neoformans is a lethal fungus that primarily affects the respiratory system and the central nervous system. One of the main virulence factors is the capsule, constituted by the polysaccharides glucuronoxylomannan (GXM) and glucuronoxylomanogalactan (GXMGal). Polysaccharides are immunomodulators. One of the target cell populations for modulation are macrophages, which are part of the first line of defense and important for innate and adaptive immunity. It has been reported that macrophages can be modulated to act as a “Trojan horse,” taking phagocytosed yeasts to strategic sites or having their machinery activation compromised. The scarcity of information on canine cryptococcosis led us to assess whether the purified capsular polysaccharides from C. neoformans would be able to modulate the microbicidal action of macrophages. In the present study, we observed that the capsular polysaccharides, GXM, GXMGal, or capsule total did not induce apoptosis in the DH82 macrophage cell line. However, it was possible to demonstrate that the phagocytic activity was decreased after treatment with polysaccharides. In addition, recovered yeasts from macrophages treated with polysaccharides after phagocytosis could be cultured, showing that their viability was not altered. The polysaccharides led to a reduction in ROS production and the mRNA expression of IL-12 and IL-6. We observed that GXMGal inhibits MHC class II expression and GXM reduces ERK phosphorylation. In contrast, GXMGal and GXM were able to increase the PPAR-γ expression. Furthermore, our data suggest that capsular polysaccharides can reduce the microbicidal activity of canine macrophages DH82. Full article
(This article belongs to the Special Issue Cryptococcus Infections and Pathogenesis)
Show Figures

Figure 1

15 pages, 4724 KiB  
Article
Effects of MrwetA on Sexual Reproduction and Secondary Metabolism of Monascus ruber M7 Based on Transcriptome Analysis
by Yuyun Huang, Lili Jia and Fusheng Chen
J. Fungi 2024, 10(5), 338; https://doi.org/10.3390/jof10050338 (registering DOI) - 8 May 2024
Abstract
wetA, one of the conidiation center regulatory genes in many filamentous fungi, plays an important role in promoting asexual spores (conidia) maturation. Our recent research has found that knocking out or overexpressing MrwetA (a homolog of wetA) in Monascus ruber M7 [...] Read more.
wetA, one of the conidiation center regulatory genes in many filamentous fungi, plays an important role in promoting asexual spores (conidia) maturation. Our recent research has found that knocking out or overexpressing MrwetA (a homolog of wetA) in Monascus ruber M7 does not affect the development of its asexual spores like other fungi, but both repress the development of its sexual spores (ascospores). However, the mechanism remains unclear. In this study, the function of MrwetA on sexual reproduction and secondary metabolism in M. ruber M7 was confirmed by a complementary experiment. Moreover, the regulatory roles of MrwetA in modulating the expression of genes involved in sexual reproduction, meiosis, and biosynthesis of Monascus pigment and citrinin were analyzed based on the transcriptional data. These results not only contribute to clarifying the regulation of the reproduction and secondary metabolism of Monascus spp., but also to enriching the regulation molecular mechanism of reproduction in filamentous fungi. Full article
(This article belongs to the Section Fungal Cell Biology, Metabolism and Physiology)
Show Figures

Figure 1

14 pages, 7549 KiB  
Article
Gate-Tunable Asymmetric Quantum Dots in Graphene-Based Heterostructures: Pure Valley Polarization and Confinement
by Adel Belayadi and Panagiotis Vasilopoulos
C 2024, 10(2), 44; https://doi.org/10.3390/c10020044 (registering DOI) - 8 May 2024
Abstract
We explore the possibility of attaining valley-dependent tunnelling and confinement using proximity-induced spin-orbit couplings (SOCs) in graphene-based heterostructures. We consider gate-tunable asymmetric quantum dots (AQDs) on graphene heterostructures and exhibiting a C3v and/or C6v symmetry. By employing a tight-binding [...] Read more.
We explore the possibility of attaining valley-dependent tunnelling and confinement using proximity-induced spin-orbit couplings (SOCs) in graphene-based heterostructures. We consider gate-tunable asymmetric quantum dots (AQDs) on graphene heterostructures and exhibiting a C3v and/or C6v symmetry. By employing a tight-binding model, we explicitly reveal a pure valley confinement and valley signal in AQDs by streaming the valley local density, leading to valley-charge separation in real space. The confinement of the valley quasi-bound states is sensitive to the locally induced SOCs and to the spatial distribution of the induced AQDs; it is also robust against on-site disorder. The adopted process of attaining a pure valley-Hall conductivity and confinement with zero charge currents is expected to provide more options towards valley-dependent electron optics. Full article
(This article belongs to the Section Carbon Skeleton)
Show Figures

Graphical abstract

Open Access Journals

Browse by Indexing Browse by Subject Selected Journals
Back to TopTop