The 2023 MDPI Annual Report has
been released!
 
14 pages, 1413 KiB  
Article
Exposure to Microcystin-LR Promotes Colorectal Cancer Progression by Altering Gut Microbiota and Associated Metabolites in APCmin/+ Mice
by Yuechi Song, Xiaochang Wang, Xiaohui Lu and Ting Wang
Toxins 2024, 16(5), 212; https://doi.org/10.3390/toxins16050212 (registering DOI) - 30 Apr 2024
Abstract
Microcystins (MCs), toxins generated by cyanobacteria, feature microcystin-LR (MC-LR) as one of the most prevalent and toxic variants in aquatic environments. MC-LR not only causes environmental problems but also presents a substantial risk to human health. This study aimed to investigate the impact [...] Read more.
Microcystins (MCs), toxins generated by cyanobacteria, feature microcystin-LR (MC-LR) as one of the most prevalent and toxic variants in aquatic environments. MC-LR not only causes environmental problems but also presents a substantial risk to human health. This study aimed to investigate the impact of MC-LR on APCmin/+ mice, considered as an ideal animal model for intestinal tumors. We administered 40 µg/kg MC-LR to mice by gavage for 8 weeks, followed by histopathological examination, microbial diversity and metabolomics analysis. The mice exposed to MC-LR exhibited a significant promotion in colorectal cancer progression and impaired intestinal barrier function in the APCmin/+ mice compared with the control. Gut microbial dysbiosis was observed in the MC-LR-exposed mice, manifesting a notable alteration in the structure of the gut microbiota. This included the enrichment of Marvinbryantia, Gordonibacter and Family_XIII_AD3011_group and reductions in Faecalibaculum and Lachnoclostridium. Metabolomics analysis revealed increased bile acid (BA) metabolites in the intestinal contents of the mice exposed to MC-LR, particularly taurocholic acid (TCA), alpha-muricholic acid (α-MCA), 3-dehydrocholic acid (3-DHCA), 7-ketodeoxycholic acid (7-KDCA) and 12-ketodeoxycholic acid (12-KDCA). Moreover, we found that Marvinbryantia and Family_XIII_AD3011_group showed the strongest positive correlation with taurocholic acid (TCA) in the mice exposed to MC-LR. These findings provide new insights into the roles and mechanisms of MC-LR in susceptible populations, providing a basis for guiding values of MC-LR in drinking water. Full article
19 pages, 814 KiB  
Article
Exploring Propolis as a Sustainable Bio-Preservative Agent to Control Foodborne Pathogens in Vacuum-Packed Cooked Ham
by Eugenia Rendueles, Elba Mauriz, Javier Sanz-Gómez, Ana M. González-Paramás, Félix Adanero-Jorge and Camino García-Fernández
Microorganisms 2024, 12(5), 914; https://doi.org/10.3390/microorganisms12050914 (registering DOI) - 30 Apr 2024
Abstract
The search for natural food additives makes propolis an exciting alternative due to its known antimicrobial activity. This work aims to investigate propolis’ behavior as a nitrite substitute ingredient in cooked ham (a ready-to-eat product) when confronted with pathogenic microorganisms of food interest. [...] Read more.
The search for natural food additives makes propolis an exciting alternative due to its known antimicrobial activity. This work aims to investigate propolis’ behavior as a nitrite substitute ingredient in cooked ham (a ready-to-eat product) when confronted with pathogenic microorganisms of food interest. The microbial evolution of Listeria monocytogenes, Staphylococcus aureus, Bacillus cereus, and Clostridium sporogenes inoculated at known doses was examined in different batches of cooked ham. The design of a challenge test according to their shelf life (45 days), pH values, and water activity allowed the determination of the mesophilic aerobic flora, psychotropic, and acid lactic bacteria viability. The test was completed with an organoleptic analysis of the samples, considering possible alterations in color and texture. The cooked ham formulation containing propolis instead of nitrites limited the potential growth (δ < 0.5 log10) of all the inoculated microorganisms until day 45, except for L. monocytogenes, which in turn exhibited a bacteriostatic effect between day 7 and 30 of the storage time. The sensory analysis revealed the consumer’s acceptance of cooked ham batches including propolis as a natural additive. These findings suggest the functionality of propolis as a promising alternative to artificial preservatives for ensuring food safety and reducing the proliferation risk of foodborne pathogens in ready-to-eat products. Full article
13 pages, 4163 KiB  
Communication
Microwave Flow Cytometric Detection and Differentiation of Escherichia coli
by Neelima Dahal, Caroline Peak, Carl Ehrett, Jeffrey Osterberg, Min Cao, Ralu Divan and Pingshan Wang
Sensors 2024, 24(9), 2870; https://doi.org/10.3390/s24092870 (registering DOI) - 30 Apr 2024
Abstract
Label-free measurement and analysis of single bacterial cells are essential for food safety monitoring and microbial disease diagnosis. We report a microwave flow cytometric sensor with a microstrip sensing device with reduced channel height for bacterial cell measurement. Escherichia coli B and Escherichia [...] Read more.
Label-free measurement and analysis of single bacterial cells are essential for food safety monitoring and microbial disease diagnosis. We report a microwave flow cytometric sensor with a microstrip sensing device with reduced channel height for bacterial cell measurement. Escherichia coli B and Escherichia coli K-12 were measured with the sensor at frequencies between 500 MHz and 8 GHz. The results show microwave properties of E. coli cells are frequency-dependent. A LightGBM model was developed to classify cell types at a high accuracy of 0.96 at 1 GHz. Thus, the sensor provides a promising label-free method to rapidly detect and differentiate bacterial cells. Nevertheless, the method needs to be further developed by comprehensively measuring different types of cells and demonstrating accurate cell classification with improved machine-learning techniques. Full article
(This article belongs to the Topic Machine Learning and Biomedical Sensors)
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27 pages, 4341 KiB  
Article
Cross-Shore Modeling Features: Calibration and Impacts of Wave Climate Uncertainties
by Frederico Romão, Carlos Coelho, Márcia Lima, Hrólfur Ásmundsson and Eric M. Myer
J. Mar. Sci. Eng. 2024, 12(5), 760; https://doi.org/10.3390/jmse12050760 (registering DOI) - 30 Apr 2024
Abstract
Numerical models can be powerful tools for evaluating the best scenarios for the construction of artificial nourishments to mitigate coastal erosion. Until recent decades, when looking at medium- to long-term simulations, cross-shore and alongshore processes have been studied separately. Accounting for both processes [...] Read more.
Numerical models can be powerful tools for evaluating the best scenarios for the construction of artificial nourishments to mitigate coastal erosion. Until recent decades, when looking at medium- to long-term simulations, cross-shore and alongshore processes have been studied separately. Accounting for both processes in a shoreline evolution numerical model would improve the understanding and predictive capacity of future changes in coastline evolution. The AX-COAST project aims to develop new capacities in modeling cross-shore sediment transport processes by adding the CS-Model, a cross-shore numerical model, into the existing LTC (Long-Term Configuration) model. The LTC model is a shoreline evolution numerical model which is a module of the cost–benefit assessment tool COAST. This work presents the first steps of the CS-Model implementation, which involve evaluating its performance by calibrating the model with extensive measured datasets of wave climate, beach profiles, tide levels, etc., from coastal areas in IJmuiden and Sand Motor in the Netherlands. The results show good agreement between modeled and observed values. Additionally, wave climate datasets derived from global and regional wave models were considered to evaluate modeling performance at IJmuiden. Using derived timeseries from the wave models did not significantly lead to different results compared to using measured data. The obtained mean absolute and relative errors for each profile were low for both types of datasets. Calibration processes with consistent data are important in modeling simulations to accurately represent the study area and ensure the credibility of future simulations. Full article
5 pages, 196 KiB  
Editorial
Editorial for the Special Issue “Machine Learning in Computer Vision and Image Sensing: Theory and Applications”
by Subrata Chakraborty and Biswajeet Pradhan
Sensors 2024, 24(9), 2874; https://doi.org/10.3390/s24092874 (registering DOI) - 30 Apr 2024
Abstract
In the original article [...] Full article
(This article belongs to the Section Sensing and Imaging)
17 pages, 4720 KiB  
Article
MortalityMinder: Visualization and AI Interpretations of Social Determinants of Premature Mortality in the United States
by Karan Bhanot, John S. Erickson and Kristin P. Bennett
Information 2024, 15(5), 254; https://doi.org/10.3390/info15050254 (registering DOI) - 30 Apr 2024
Abstract
MortalityMinder enables healthcare researchers, providers, payers, and policy makers to gain actionable insights into where and why premature mortality rates due to all causes, cancer, cardiovascular disease, and deaths of despair rose between 2000 and 2017 for adults aged 25–64. MortalityMinder is designed [...] Read more.
MortalityMinder enables healthcare researchers, providers, payers, and policy makers to gain actionable insights into where and why premature mortality rates due to all causes, cancer, cardiovascular disease, and deaths of despair rose between 2000 and 2017 for adults aged 25–64. MortalityMinder is designed as an open-source web-based visualization tool that enables interactive analysis and exploration of social, economic, and geographic factors associated with mortality at the county level. We provide case studies to illustrate how MortalityMinder finds interesting relationships between health determinants and deaths of despair. We also demonstrate how GPT-4 can help translate statistical results from MortalityMinder into actionable insights to improve population health. When combined with MortalityMinder results, GPT-4 provides hypotheses on why socio-economic risk factors are associated with mortality, how they might be causal, and what actions could be taken related to the risk factors to improve outcomes with supporting citations. We find that GPT-4 provided plausible and insightful answers about the relationship between social determinants and mortality. Our work is a first step towards enabling public health stakeholders to automatically discover and visualize relationships between social determinants of health and mortality based on available data and explain and transform these into meaningful results using artificial intelligence. Full article
(This article belongs to the Special Issue Interactive Machine Learning and Visual Data Mining)
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15 pages, 4481 KiB  
Article
A Deformation Analysis Method for Sluice Structure Based on Panel Data
by Zekai Ma, Benxing Lou, Zhenzhong Shen, Fuheng Ma, Xiang Luo, Wei Ye, Xing Li and Dongze Li
Water 2024, 16(9), 1287; https://doi.org/10.3390/w16091287 (registering DOI) - 30 Apr 2024
Abstract
Deformation, as the most intuitive index, can reflect the operation status of hydraulic structures comprehensively, and reasonable analysis of deformation behavior has important guiding significance for structural long-term service. Currently, the health evaluation of dam deformation behavior has attracted widespread attention and extensive [...] Read more.
Deformation, as the most intuitive index, can reflect the operation status of hydraulic structures comprehensively, and reasonable analysis of deformation behavior has important guiding significance for structural long-term service. Currently, the health evaluation of dam deformation behavior has attracted widespread attention and extensive research from scholars due to its great importance. However, given that the sluice is a low-head hydraulic structure, the consequences of its failure are easily overlooked without sufficient attention. While the influencing factors of the sluice’s deformation are almost identical to those of a concrete dam, nonuniform deformation is the key issue in the sluice’s case because of the uneven property of the external load and soil foundation, and referencing the traditional deformation statistical model of a concrete dam cannot directly represent the nonuniform deformation behavior of a sluice. In this paper, we assume that the deformation at various positions of the sluice consist of both overall and individual effects, where overall effect values describe the deformation response trend of the sluice structure under external loads, and individual effect values represent the degree to which the deformation of a single point deviates from the overall deformation. Then, the random coefficient model of panel data is introduced into the analysis of sluice deformation to handle the unobservable overall and individual effects. Furthermore, the maximum entropy principle is applied, both to approximate the probability distribution function of individual effect extreme values and to determine the early warning indicators, completing the assessment and analysis of the nonuniform deformation state. Finally, taking a project as an example, we show that the method proposed can effectively identify the overall deformation trend of the sluice and the deviation degree of each measuring point from the overall deformation, which provides a novel approach for sluice deformation behavior research. Full article
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9 pages, 920 KiB  
Brief Report
Blood Group Variations in COVID-19 Convalescent Plasma and Regular Blood Donors: A Comparative Analysis in the Serbian Population
by Jasmina Grujić, Zorana Budakov-Obradović, Jelena Klašnja, Radovan Dinić, Vladimir Dolinaj, Alejandro Cabezas-Cruz and Pavle Banović
Microorganisms 2024, 12(5), 915; https://doi.org/10.3390/microorganisms12050915 (registering DOI) - 30 Apr 2024
Abstract
This research explores the association between ABO blood groups and susceptibility to SARS-CoV-2 infection, analyzing Convalescent COVID-19 plasma (CCP) donors (n = 500) and healthy whole blood donors (BDs) (n = 9678) during the pandemic (1 May 2020 to 30 April [...] Read more.
This research explores the association between ABO blood groups and susceptibility to SARS-CoV-2 infection, analyzing Convalescent COVID-19 plasma (CCP) donors (n = 500) and healthy whole blood donors (BDs) (n = 9678) during the pandemic (1 May 2020 to 30 April 2021). A comparison is made with pre-pandemic BDs (n = 11,892) from 1 May 2018 to 30 April 2019. Significant differences in blood group distribution are observed, with blood group A individuals being three times more likely to be CCP donors. Conversely, blood groups B, O, and AB are less associated with CCP donation. Notably, blood group O is more prevalent among regular BDs, suggesting potential resistance to SARS-CoV-2 infection. This study underscores variations in blood group distribution during the pandemic compared to pre-pandemic periods. The findings support previous research indicating a link between blood group antigens and viral susceptibility, including SARS-CoV-2. Understanding these associations has implications for public health strategies, with potential for predicting COVID-19 outcomes and transmission patterns. Further research is crucial to explore molecular and immunological mechanisms, providing valuable insights for targeted preventive strategies and personalized healthcare in managing the impact of COVID-19. Full article
(This article belongs to the Special Issue Advances in SARS-CoV-2 Infection—Third Edition)
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20 pages, 10103 KiB  
Article
Small-Molecule Inhibitors of TIPE3 Protein Identified through Deep Learning Suppress Cancer Cell Growth In Vitro
by Xiaodie Chen, Zhen Lu, Jin Xiao, Wei Xia, Yi Pan, Houjun Xia, Youhai H. Chen and Haiping Zhang
Cells 2024, 13(9), 771; https://doi.org/10.3390/cells13090771 (registering DOI) - 30 Apr 2024
Abstract
Tumor necrosis factor-α-induced protein 8-like 3 (TNFAIP8L3 or TIPE3) functions as a transfer protein for lipid second messengers. TIPE3 is highly upregulated in several human cancers and has been established to significantly promote tumor cell proliferation, migration, and invasion and inhibit the apoptosis [...] Read more.
Tumor necrosis factor-α-induced protein 8-like 3 (TNFAIP8L3 or TIPE3) functions as a transfer protein for lipid second messengers. TIPE3 is highly upregulated in several human cancers and has been established to significantly promote tumor cell proliferation, migration, and invasion and inhibit the apoptosis of cancer cells. Thus, inhibiting the function of TIPE3 is expected to be an effective strategy against cancer. The advancement of artificial intelligence (AI)-driven drug development has recently invigorated research in anti-cancer drug development. In this work, we incorporated DFCNN, Autodock Vina docking, DeepBindBC, MD, and metadynamics to efficiently identify inhibitors of TIPE3 from a ZINC compound dataset. Six potential candidates were selected for further experimental study to validate their anti-tumor activity. Among these, three small-molecule compounds (K784-8160, E745-0011, and 7238-1516) showed significant anti-tumor activity in vitro, leading to reduced tumor cell viability, proliferation, and migration and enhanced apoptotic tumor cell death. Notably, E745-0011 and 7238-1516 exhibited selective cytotoxicity toward tumor cells with high TIPE3 expression while having little or no effect on normal human cells or tumor cells with low TIPE3 expression. A molecular docking analysis further supported their interactions with TIPE3, highlighting hydrophobic interactions and their shared interaction residues and offering insights for designing more effective inhibitors. Taken together, this work demonstrates the feasibility of incorporating deep learning and MD simulations in virtual drug screening and provides inhibitors with significant potential for anti-cancer drug development against TIPE3−. Full article
16 pages, 827 KiB  
Article
Machine Learning-Based Prediction of Stability in High-Entropy Nitride Ceramics
by Tianyu Lin, Ruolan Wang and Dazhi Liu
Crystals 2024, 14(5), 429; https://doi.org/10.3390/cryst14050429 (registering DOI) - 30 Apr 2024
Abstract
The field of materials science has experienced a transformative shift with the emergence of high-entropy materials (HEMs), which possess a unique combination of properties that traditional single-phase materials lack. Among these, high-entropy nitrides (HENs) stand out for their exceptional mechanical strength, thermal stability, [...] Read more.
The field of materials science has experienced a transformative shift with the emergence of high-entropy materials (HEMs), which possess a unique combination of properties that traditional single-phase materials lack. Among these, high-entropy nitrides (HENs) stand out for their exceptional mechanical strength, thermal stability, and resistance to extreme environments, making them highly sought after for applications in aerospace, defense, and energy sectors. Central to the design of these materials is their entropy forming ability (EFA), a measure of a material’s propensity to form a single-phase, disordered structure. This study introduces the application of the sure independence screening and sparsifying operator (SISSO), a machine learning technique, to predict the EFA of HEN ceramics. By utilizing a rich dataset curated from theoretical computational data, SISSO has been trained to identify the most critical features contributing to EFA. The model’s strong interpretability allows for the extraction of complex mathematical expressions, providing deep insights into the material’s composition and its impact on EFA. The predictive performance of the SISSO model is meticulously validated against theoretical benchmarks and compared with other machine learning methodologies, demonstrating its superior accuracy and reliability. This research not only contributes to the growing body of knowledge on HEMs but also paves the way for the efficient discovery and development of new HEN materials with tailored properties for advanced technological applications. Full article
(This article belongs to the Special Issue Advances in High Entropy Ceramics)
14 pages, 799 KiB  
Review
The Role of Extracellular Vesicles in Metabolic Diseases
by Carlos González-Blanco, Sarai Iglesias-Fortes, Ángela Cristina Lockwood, César Figaredo, Daniela Vitulli and Carlos Guillén
Biomedicines 2024, 12(5), 992; https://doi.org/10.3390/biomedicines12050992 (registering DOI) - 30 Apr 2024
Abstract
Extracellular vesicles represent a group of structures with the capacity to communicate with different cells and organs. This complex network of interactions can regulate multiple physiological processes in the organism. Very importantly, these processes can be altered during the appearance of different diseases [...] Read more.
Extracellular vesicles represent a group of structures with the capacity to communicate with different cells and organs. This complex network of interactions can regulate multiple physiological processes in the organism. Very importantly, these processes can be altered during the appearance of different diseases including cancer, metabolic diseases, etc. In addition, these extracellular vesicles can transport different cargoes, altering the initiation of the disease, driving the progression, or even accelerating the pathogenesis. Then, we have explored the implication of these structures in different alterations such as pancreatic cancer, and in different metabolic alterations such as diabetes and its complications and non-alcoholic fatty liver disease. Finally, we have explored in more detail the communication between the liver and the pancreas. In summary, extracellular vesicles represent a very efficient system for the communication among different tissues and permit an efficient system as biomarkers of the disease, as well as being involved in the extracellular-vesicle-mediated transport of molecules, serving as a potential therapy for different diseases. Full article
30 pages, 7872 KiB  
Article
Unveiling the Dynamics of Rural Revitalization: From Disorder to Harmony in China’s Production-Life-Ecology Space
by Ningning Liu, Qikang Zhong and Kai Zhu
Land 2024, 13(5), 604; https://doi.org/10.3390/land13050604 (registering DOI) - 30 Apr 2024
Abstract
This study utilizes provincial panel data from China spanning the period from 2011 to 2020 to assess the coupled and coordinated development of spatial functions related to production, life, and ecology (PLE) in rural areas. The assessment is based on quantifying the spatial [...] Read more.
This study utilizes provincial panel data from China spanning the period from 2011 to 2020 to assess the coupled and coordinated development of spatial functions related to production, life, and ecology (PLE) in rural areas. The assessment is based on quantifying the spatial function indices for PLE in China’s rural regions. Additionally, it examines the characteristics of their spatial and temporal evolution, spatial correlation, and driving factors. The findings indicate a modest upward trend in the spatial coupling and coordination levels of these functions across rural China, although a significant proportion of provinces still exhibit a near-disordered decline. Exploratory spatial data analysis reveals a geographical disparity, with higher levels of coupled and coordinated development observed in the eastern regions, lower levels in the west, and noticeable spatial clustering. By employing the spatial Durbin model to investigate the determinants of coupling degrees, we discovered that factors such as regional economic development, urbanization, the urban–rural income gap, financial support for agriculture, science and technology investment level, and agricultural structural adjustments significantly influence the spatial coupling of rural PLE functions. Furthermore, using the geographic detector model, the analysis identifies science and technology investment level, economic development, and financial support for agriculture as key drivers influencing the spatial coupling and coordination of these functions. These findings provide valuable reference points for policies and strategies related to rural management. Full article
24 pages, 939 KiB  
Article
High-Level Process Modeling—An Experimental Investigation of the Cognitive Effectiveness of Process Landscape Diagrams
by Gregor Polančič and Katja Kous
Mathematics 2024, 12(9), 1376; https://doi.org/10.3390/math12091376 (registering DOI) - 30 Apr 2024
Abstract
Unlike business process diagrams, where ISO/IEC 19510 (BPMN 2.0) prevails, high-level process landscape diagrams are being designed using a variety of standard- or semi-standard-based notations. Consequently, landscape diagrams differ among organizations, domains, and modeling tools. As (process landscape) diagrams need to be understandable [...] Read more.
Unlike business process diagrams, where ISO/IEC 19510 (BPMN 2.0) prevails, high-level process landscape diagrams are being designed using a variety of standard- or semi-standard-based notations. Consequently, landscape diagrams differ among organizations, domains, and modeling tools. As (process landscape) diagrams need to be understandable in order to communicate effectively and thus form the basis for valid business decisions, this study aims to empirically validate the cognitive effectiveness of common landscape designs, including those BPMN-L-based, which represent a standardized extension of BPMN 2.0 specifically aimed at landscape modeling. Empirical research with 298 participants was conducted in which cognitive effectiveness was investigated by observing the speed, ease, accuracy, and efficiency of answering questions related to semantically equivalent process landscape diagrams modeled in three different notations: value chains, ArchiMate, and BPMN-L. The results demonstrate that BPMN-L-based diagrams performed better than value chain- and ArchiMate-based diagrams concerning speed, accuracy, and efficiency; however, subjects perceived BPMN-L-based diagrams as being less easy to use when compared to their counterparts. The results indicate that differences in cognitive effectiveness measures may result from the design principles of the underlying notations, specifically the complexity of the visual vocabulary and semiotic clarity, which states that modeling concepts should have unique visualizations. Full article
(This article belongs to the Special Issue Industrial Big Data and Process Modelling for Smart Manufacturing)
16 pages, 3552 KiB  
Article
Hidden Variable Discovery Based on Regression and Entropy
by Xingyu Liao and Xiaoping Liu
Mathematics 2024, 12(9), 1375; https://doi.org/10.3390/math12091375 (registering DOI) - 30 Apr 2024
Abstract
Inferring causality from observed data is crucial in many scientific fields, but this process is often hindered by incomplete data. The incomplete data can lead to mistakes in understanding how variables affect each other, especially when some influencing factors are not directly observed. [...] Read more.
Inferring causality from observed data is crucial in many scientific fields, but this process is often hindered by incomplete data. The incomplete data can lead to mistakes in understanding how variables affect each other, especially when some influencing factors are not directly observed. To tackle this problem, we’ve developed a new algorithm called Regression Loss-increased with Causal Intensity (RLCI). This approach uses regression and entropy analysis to uncover hidden variables. Through tests on various real-world datasets, RLCI has been proven to be effective. It can help spot hidden factors that may affect the relationship between variables and determine the direction of causal relationships. Full article
(This article belongs to the Special Issue Mathematical Models and Computer Science Applied to Biology)
38 pages, 2703 KiB  
Review
Central Causation of Autism/ASDs via Excessive [Ca2+]i Impacting Six Mechanisms Controlling Synaptogenesis during the Perinatal Period: The Role of Electromagnetic Fields and Chemicals and the NO/ONOO(-) Cycle, as Well as Specific Mutations
by Martin L. Pall
Brain Sci. 2024, 14(5), 454; https://doi.org/10.3390/brainsci14050454 (registering DOI) - 30 Apr 2024
Abstract
The roles of perinatal development, intracellular calcium [Ca2+]i, and synaptogenesis disruption are not novel in the autism/ASD literature. The focus on six mechanisms controlling synaptogenesis, each regulated by [Ca2+]i, and each aberrant in ASDs is novel. The model presented [...] Read more.
The roles of perinatal development, intracellular calcium [Ca2+]i, and synaptogenesis disruption are not novel in the autism/ASD literature. The focus on six mechanisms controlling synaptogenesis, each regulated by [Ca2+]i, and each aberrant in ASDs is novel. The model presented here predicts that autism epidemic causation involves central roles of both electromagnetic fields (EMFs) and chemicals. EMFs act via voltage-gated calcium channel (VGCC) activation and [Ca2+]i elevation. A total of 15 autism-implicated chemical classes each act to produce [Ca2+]i elevation, 12 acting via NMDA receptor activation, and three acting via other mechanisms. The chronic nature of ASDs is explained via NO/ONOO(-) vicious cycle elevation and MeCP2 epigenetic dysfunction. Genetic causation often also involves [Ca2+]i elevation or other impacts on synaptogenesis. The literature examining each of these steps is systematically examined and found to be consistent with predictions. Approaches that may be sed for ASD prevention or treatment are discussed in connection with this special issue: The current situation and prospects for children with ASDs. Such approaches include EMF, chemical avoidance, and using nutrients and other agents to raise the levels of Nrf2. An enriched environment, vitamin D, magnesium, and omega-3s in fish oil may also be helpful. Full article
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13 pages, 2269 KiB  
Article
A Year-Long Measurement and Source Contributions of Volatile Organic Compounds in Nanning, South China
by Ying Wu, Zhaoyu Mo, Qinqin Wu, Yongji Fan, Xuemei Chen, Hongjiao Li, Hua Lin, Xishou Huang, Hualei Tang, Donglan Liao, Huilin Liu and Ziwei Mo
Atmosphere 2024, 15(5), 560; https://doi.org/10.3390/atmos15050560 (registering DOI) - 30 Apr 2024
Abstract
Severe ozone (O3) pollution has been recorded in China in recent years. The key precursor, volatile organic compounds (VOCs), is still not well understood in Nanning, which is a less developed city compared to other megacities in China. In this study, [...] Read more.
Severe ozone (O3) pollution has been recorded in China in recent years. The key precursor, volatile organic compounds (VOCs), is still not well understood in Nanning, which is a less developed city compared to other megacities in China. In this study, a year-long measurement of VOCs was conducted from 1 October 2020 to 30 September 2021, to characterize the ambient variations and apportion the source contributions of VOCs. The daily-averaged concentration of VOCs was measured to be 26.4 ppb, ranging from 3.2 ppb to 136.2 ppb across the whole year. Alkanes and oxygenated VOCs (OVOCs) were major species, contributing 46.9% and 25.2% of total VOC concentrations, respectively. Propane, ethane, and ethanol were the most abundant in Nanning, which differed from the other significant species, such as toluene (3.7 ppb) in Guangzhou, ethylene (3.8 ppb) in Nanjing, and isopentane (5.5 ppb), in Chengdu. The positive matrix factorization (PMF) model resolved six source factors, including vehicular emission (contributing 33% of total VOCs), NG and LPG combustion (19%), fuel burning (17%), solvent use (16%), industry emission (10%), and biogenic emission (5%). This indicated that Nanning was less affected by industrial emission compared with other megacities of China, with industry contributing 12–50%. Ethylene, m/p-xylene, butane, propylene, and isoprene were key species determined by ozone formation potential (OFP) analysis, which should be priority-controlled. The variations in estimated OFP and observed O3 concentrations were significantly different, suggesting that VOC reactivity-based strategies as well as meteorological and NOx effects should be considered collectively in controlling O3 pollution. This study presents a year-long dataset of VOC measurements in Nanning, which gives valuable implications for VOC control in terms of key sources and reactive species and is also beneficial to the formulation of effective ozone control strategies in other less developed regions of China. Full article
(This article belongs to the Special Issue Urban VOC Emission, Transport, and Chemistry (VOC/ETC))
21 pages, 12347 KiB  
Article
Optimizing Vision Transformers for Histopathology: Pretraining and Normalization in Breast Cancer Classification
by Giulia Lucrezia Baroni, Laura Rasotto, Kevin Roitero, Angelica Tulisso, Carla Di Loreto and Vincenzo Della Mea
J. Imaging 2024, 10(5), 108; https://doi.org/10.3390/jimaging10050108 (registering DOI) - 30 Apr 2024
Abstract
This paper introduces a self-attention Vision Transformer model specifically developed for classifying breast cancer in histology images. We examine various training strategies and configurations, including pretraining, dimension resizing, data augmentation and color normalization strategies, patch overlap, and patch size configurations, in order to [...] Read more.
This paper introduces a self-attention Vision Transformer model specifically developed for classifying breast cancer in histology images. We examine various training strategies and configurations, including pretraining, dimension resizing, data augmentation and color normalization strategies, patch overlap, and patch size configurations, in order to evaluate their impact on the effectiveness of the histology image classification. Additionally, we provide evidence for the increase in effectiveness gathered through geometric and color data augmentation techniques. We primarily utilize the BACH dataset to train and validate our methods and models, but we also test them on two additional datasets, BRACS and AIDPATH, to verify their generalization capabilities. Our model, developed from a transformer pretrained on ImageNet, achieves an accuracy rate of 0.91 on the BACH dataset, 0.74 on the BRACS dataset, and 0.92 on the AIDPATH dataset. Using a model based on the prostate small and prostate medium HistoEncoder models, we achieve accuracy rates of 0.89 and 0.86, respectively. Our results suggest that pretraining on large-scale general datasets like ImageNet is advantageous. We also show the potential benefits of using domain-specific pretraining datasets, such as extensive histopathological image collections as in HistoEncoder, though not yet with clear advantages. Full article
36 pages, 3986 KiB  
Article
Conceptualization and Potential of Agritourism in Extremadura (Spain) from the Perspective of Tourism Demand
by José Manuel Sánchez-Martín, Rebeca Guillén-Peñafiel, Paloma Flores-García and María José García-Berzosa
Agriculture 2024, 14(5), 716; https://doi.org/10.3390/agriculture14050716 (registering DOI) - 30 Apr 2024
Abstract
The current literature considers agritourism as a valid option for promoting the development of rural areas. This would be achieved by increasing agricultural incomes. However, numerous scientific studies have revealed the difficulty in reaching a consensus on the very concept of agritourism. In [...] Read more.
The current literature considers agritourism as a valid option for promoting the development of rural areas. This would be achieved by increasing agricultural incomes. However, numerous scientific studies have revealed the difficulty in reaching a consensus on the very concept of agritourism. In addition, the definition of agritourism is rarely related to the opinion of the demand. For this reason, this research aimed to understand the idea that tourists have about this variety. To this end, more than 500 surveys were carried out, from which the tourists’ conception of agritourism and the activities it entails were deduced. Other questions were also analyzed to determine whether the conception varies between those who have already performed this type of activity and those who have not yet had the opportunity to do so. From this, we can deduct the interest that visitors have in agritourism products, evidencing their potential. This interest is deduced through the visualization of different landscapes and activities of interest to tourists. Under these four central points, the aim was to understand the aims of agritourism in Extremadura (Spain). At the methodological level, a combination of descriptive statistics and spatial statistics was used, highlighting the use of cluster analysis. The results show a significant lack of knowledge of the meaning of agritourism, especially among those who have never practiced it, and of the activities associated with it. At the same time, the selection of landscapes preferred by tourists makes it possible to establish areas with potential for the development of these activities. Likewise, knowing which activities are of interest to tourists also helps to generate complementary activities and to better target the design of agrotourism products. Full article
(This article belongs to the Special Issue Sustainable Rural Development and Agri-Food Systems—2nd Edition)
13 pages, 1319 KiB  
Article
Lévy Flight Model of Gaze Trajectories to Assist in ADHD Diagnoses
by Christos Papanikolaou, Akriti Sharma, Pedro G. Lind and Pedro Lencastre
Entropy 2024, 26(5), 392; https://doi.org/10.3390/e26050392 (registering DOI) - 30 Apr 2024
Abstract
The precise mathematical description of gaze patterns remains a topic of ongoing debate, impacting the practical analysis of eye-tracking data. In this context, we present evidence supporting the appropriateness of a Lévy flight description for eye-gaze trajectories, emphasizing its beneficial scale-invariant properties. Our [...] Read more.
The precise mathematical description of gaze patterns remains a topic of ongoing debate, impacting the practical analysis of eye-tracking data. In this context, we present evidence supporting the appropriateness of a Lévy flight description for eye-gaze trajectories, emphasizing its beneficial scale-invariant properties. Our study focuses on utilizing these properties to aid in diagnosing Attention-Deficit and Hyperactivity Disorder (ADHD) in children, in conjunction with standard cognitive tests. Using this method, we found that the distribution of the characteristic exponent of Lévy flights statistically is different in children with ADHD. Furthermore, we observed that these children deviate from a strategy that is considered optimal for searching processes, in contrast to non-ADHD children. We focused on the case where both eye-tracking data and data from a cognitive test are present and show that the study of gaze patterns in children with ADHD can help in identifying this condition. Since eye-tracking data can be gathered during cognitive tests without needing extra time-consuming specific tasks, we argue that it is in a prime position to provide assistance in the arduous task of diagnosing ADHD. Full article
(This article belongs to the Special Issue Stochastic Thermodynamics of Microscopic Systems)
24 pages, 2262 KiB  
Article
Research on Mechanical Properties of Steel–Polypropylene Fiber-Reinforced Concrete after High-Temperature Treatments
by Xinggang Shen, Xia Li, Lei Liu, Xinzuo Chen and Jun Du
Appl. Sci. 2024, 14(9), 3861; https://doi.org/10.3390/app14093861 (registering DOI) - 30 Apr 2024
Abstract
A mechanical property experiment was carried out on steel-polypropylene fiber-reinforced concrete after elevated temperatures by using a 50 mm diameter SHPB apparatus. The regulations of compressive strength, elastic modulus, Poisson’s ratio, and other mechanical properties under six heating temperature levels (normal temperature, 100 [...] Read more.
A mechanical property experiment was carried out on steel-polypropylene fiber-reinforced concrete after elevated temperatures by using a 50 mm diameter SHPB apparatus. The regulations of compressive strength, elastic modulus, Poisson’s ratio, and other mechanical properties under six heating temperature levels (normal temperature, 100 °C, 200 °C, 400 °C, 600 °C, and 800 °C) and three impact pressures (0.3 MPa, 0.4 MPa, 0.5 MPa) were studied. Using ANSYS/LS-DYNA 19.0 numerical simulation software and LS-PrePost post-processing software, numerical simulation analysis was conducted on the dynamic Hopkinson uniaxial impact compression and uniaxial dynamic impact splitting mechanical experiments of C40 plain concrete and steel–polypropylene hybrid fiber concrete. The results show that the dynamic compressive strength of hybrid fiber concrete with the optimal dosage reaches its maximum at a temperature group of 200 °C, and the dynamic compressive strength of hybrid fiber concrete with the optimal dosage increases by 97.1% compared to C40 plain concrete at a temperature group of 800 °C. The impact waveform and stress–strain curve results of the numerical simulation are very similar to the experimental results. The errors in calculating the peak stress and peak strain are within 6%, which can truly and accurately simulate the static mechanical properties and failure process of hybrid fiber-reinforced concrete. Full article
(This article belongs to the Topic Complex Rock Mechanics Problems and Solutions)
23 pages, 530 KiB  
Review
A Modern Approach to the Treatment of Traumatic Brain Injury
by Marat Syzdykbayev, Maksut Kazymov, Marat Aubakirov, Aigul Kurmangazina, Ernar Kairkhanov, Rustem Kazangapov, Zhanna Bryzhakhina, Saule Imangazinova and Anton Sheinin
Medicines 2024, 11(5), 10; https://doi.org/10.3390/medicines11050010 (registering DOI) - 30 Apr 2024
Abstract
Traumatic brain injury manifests itself in various forms, ranging from mild impairment of consciousness to severe coma and death. Traumatic brain injury remains one of the leading causes of morbidity and mortality. Currently, there is no therapy to reverse the effects associated with [...] Read more.
Traumatic brain injury manifests itself in various forms, ranging from mild impairment of consciousness to severe coma and death. Traumatic brain injury remains one of the leading causes of morbidity and mortality. Currently, there is no therapy to reverse the effects associated with traumatic brain injury. New neuroprotective treatments for severe traumatic brain injury have not achieved significant clinical success. Methods: A literature review was performed to summarize the recent interdisciplinary findings on management of traumatic brain injury from both clinical and experimental perspective. Results: In the present review, we discuss the concepts of traditional and new approaches to treatment of traumatic brain injury. The recent development of different drug delivery approaches to the central nervous system is also discussed. Conclusions: The management of traumatic brain injury could be aimed either at the pathological mechanisms initiating the secondary brain injury or alleviating the symptoms accompanying the injury. In many cases, however, the treatment should be complex and include a variety of medical interventions and combination therapy. Full article
(This article belongs to the Section Neurology and Neurologic Diseases)
12 pages, 599 KiB  
Article
Shorter Door-to-ECG Time Is Associated with Improved Mortality in STEMI Patients
by Maame Yaa A. B. Yiadom, Wu Gong, Sean M. Bloos, Gabrielle Bunney, Rana Kabeer, Melissa A. Pasao, Fatima Rodriguez, Christopher W. Baugh, Angela M. Mills, Nicholas Gavin, Seth R. Podolsky, Gilberto A. Salazar, Brian Patterson, Bryn E. Mumma, Mary E. Tanski and Dandan Liu
J. Clin. Med. 2024, 13(9), 2650; https://doi.org/10.3390/jcm13092650 (registering DOI) - 30 Apr 2024
Abstract
Background: Delayed intervention for ST-segment elevation myocardial infarction (STEMI) is associated with higher mortality. The association of door-to-ECG (D2E) with clinical outcomes has not been directly explored in a contemporary US-based population. Methods: This was a three-year, 10-center, retrospective cohort study of ED-diagnosed [...] Read more.
Background: Delayed intervention for ST-segment elevation myocardial infarction (STEMI) is associated with higher mortality. The association of door-to-ECG (D2E) with clinical outcomes has not been directly explored in a contemporary US-based population. Methods: This was a three-year, 10-center, retrospective cohort study of ED-diagnosed patients with STEMI comparing mortality between those who received timely (<10 min) vs. untimely (>10 min) diagnostic ECG. Among survivors, we explored left ventricular ejection fraction (LVEF) dysfunction during the STEMI encounter and recovery upon post-discharge follow-up. Results: Mortality was lower among those who received a timely ECG where one-week mortality was 5% (21/420) vs. 10.2% (26/256) among those with untimely ECGs (p = 0.016), and in-hospital mortality was 6.0% (25/420) vs. 10.9% (28/256) (p = 0.028). Data to compare change in LVEF metrics were available in only 24% of patients during the STEMI encounter and 46.5% on discharge follow-up. Conclusions: D2E within 10 min may be associated with a 50% reduction in mortality among ED STEMI patients. LVEF dysfunction is the primary resultant morbidity among STEMI survivors but was infrequently assessed despite low LVEF being an indication for survival-improving therapy. It will be difficult to assess the impact of STEMI care interventions without more consistent LVEF assessment. Full article
5 pages, 418 KiB  
Editorial
Special Issue “Horticultural Plant Nutrition, Fertilization and Soil Management”
by Fernando del Moral Torres
Horticulturae 2024, 10(5), 456; https://doi.org/10.3390/horticulturae10050456 (registering DOI) - 30 Apr 2024
Abstract
The world’s population is expected to increase from the current 8 billion to 9 [...] Full article
(This article belongs to the Special Issue Horticultural Plant Nutrition, Fertilization, Soil Management)

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