The 2023 MDPI Annual Report has
been released!
 
20 pages, 4613 KiB  
Article
Irrigation Practices and Their Effects on Soil Quality and Soil Characteristics in Arid Lands: A Comprehensive Geomatic Analysis
by Mohamed E. Fadl, Yasser A. Sayed, Ahmed I. El-Desoky, Eltaher M. Shams, Mohammedi Zekari, Elsayed A. Abdelsamie, Marios Drosos and Antonio Scopa
Soil Syst. 2024, 8(2), 52; https://doi.org/10.3390/soilsystems8020052 (registering DOI) - 07 May 2024
Abstract
Comprehension of the long-term effects of irrigation on basic soil characteristics and quality is essential for sustainable land management and agricultural production, particularly in arid regions where water availability is limited. This study aimed to investigate long-term irrigation effects on soil quality, soil [...] Read more.
Comprehension of the long-term effects of irrigation on basic soil characteristics and quality is essential for sustainable land management and agricultural production, particularly in arid regions where water availability is limited. This study aimed to investigate long-term irrigation effects on soil quality, soil organic carbon (SOC), and nitrogen (N) stocks in the arid lands of Egypt. Seventy soil samples were collected and analyzed to determine various soil properties. A soil quality index (SQI), SOC, and N stocks were computed. ANOVA and PCA analyses were used to identify significant differences between alluvial soils in the southwest part of the investigated area and coastal marine soils in the northeast of the study area. The results demonstrated that most of the studied soil parameters had significantly greater values in alluvial compared to coastal marine soils. Long-term irrigation led to an 8.00% increase in SOC and 7.22% increase in N stocks compared to coastal marine soils production. Furthermore, a 39.53% increase was found in the SQI upon long-term irrigation practice. These results suggest that shifting from rain-fed in coastal marine areas to irrigated production systems in alluvial fields can improve soil quality, SOC, and N stocks. Therefore, further studies are required to investigate the impact of additional factors, such as irrigation method and salinity status of sub-surface soil layers, to enhance agricultural productivity and sustainable land use. Full article
(This article belongs to the Special Issue Land Use and Management on Soil Properties and Processes)
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24 pages, 3197 KiB  
Article
Tactile Speech Communication: Reception of Words and Two-Way Messages through a Phoneme-Based Display
by Jaehong Jung, Charlotte M. Reed, Juan S. Martinez and Hong Z. Tan
Virtual Worlds 2024, 3(2), 184-207; https://doi.org/10.3390/virtualworlds3020010 (registering DOI) - 07 May 2024
Abstract
The long-term goal of this research is the development of a stand-alone tactile device for the communication of speech for persons with profound sensory deficits as well as for applications for persons with intact hearing and vision. Studies were conducted with a phoneme-based [...] Read more.
The long-term goal of this research is the development of a stand-alone tactile device for the communication of speech for persons with profound sensory deficits as well as for applications for persons with intact hearing and vision. Studies were conducted with a phoneme-based tactile display of speech consisting of a 4-by-6 array of tactors worn on the dorsal and ventral surfaces of the forearm. Unique tactile signals were assigned to the 39 English phonemes. Study I consisted of training and testing on the identification of 4-phoneme words. Performance on a trained set of 100 words averaged 87% across the three participants and generalized well to a novel set of words (77%). Study II consisted of two-way messaging between two users of TAPS (TActile Phonemic Sleeve) for 13 h over 45 days. The participants conversed with each other by inputting text that was translated into tactile phonemes sent over the device. Messages were identified with an accuracy of 73% correct in conjunction with 82% of the words. Although rates of communication were slow (roughly 1 message per minute), the results obtained with this ecologically valid procedure represent progress toward the goal of a stand-alone tactile device for speech communication. Full article
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2 pages, 148 KiB  
Editorial
Editorial for Special Issue “Genesis and Evolution of Pb-Zn-Ag Polymetallic Deposits”
by Yitian Wang and Changqing Zhang
Minerals 2024, 14(5), 494; https://doi.org/10.3390/min14050494 (registering DOI) - 07 May 2024
Abstract
Pb-Zn-Ag polymetallic deposits are complex and diverse [...] Full article
(This article belongs to the Special Issue Genesis and Evolution of Pb-Zn-Ag Polymetallic Deposits)
13 pages, 4030 KiB  
Article
Assessment of the Potential Contribution of the Urban Green System to the Carbon Balance of Cities
by Maria Elena Menconi, Livia Bonciarelli and David Grohmann
Environments 2024, 11(5), 98; https://doi.org/10.3390/environments11050098 (registering DOI) - 07 May 2024
Abstract
Reducing greenhouse gas emissions is a crucial challenge in urban areas characterized by high energy consumption and reduced exposure to nature. In this context, the urban green system could play a pivotal role. In the literature, scholars have analyzed both the ability of [...] Read more.
Reducing greenhouse gas emissions is a crucial challenge in urban areas characterized by high energy consumption and reduced exposure to nature. In this context, the urban green system could play a pivotal role. In the literature, scholars have analyzed both the ability of species-specific and layout-specific green infrastructure to increase carbon sequestration and the best location sites for new green infrastructure to increase the provision of overall ecosystem services. There is a lack of studies helping green urban planners and designers choose where and which green infrastructure to implement based on vegetation species-specific performance and the local carbon emissions of city components. This paper uses tree inventory data from a medium-sized city in central Italy (Perugia) to develop a spatial analysis of urban park performance in carbon sequestration. Then, the method evaluates the carbon emission of a public city building to generate a spatialized balance between building demand and tree supply to support local decisions about the best locations for new green infrastructure and the choice between species. The paper contributes to GIS-based tools that vary the recommended location sites and species for new green infrastructure based on the demanded ecosystem service. Full article
(This article belongs to the Special Issue Carbon Sequestration Potential of Urban Parks)
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3 pages, 142 KiB  
Editorial
River Ecological Restoration and Groundwater Artificial Recharge II
by Yuanzheng Zhai and Jin Wu
Water 2024, 16(10), 1328; https://doi.org/10.3390/w16101328 (registering DOI) - 07 May 2024
Abstract
The depletion of rivers and groundwater caused by climate change and human activity is threatening water security and ecosystems [...] Full article
(This article belongs to the Special Issue River Ecological Restoration and Groundwater Artificial Recharge II)
11 pages, 2375 KiB  
Article
Seroprevalence of Herpes Simplex Virus Types 1 and 2 among Pregnant Women in South-Western Romania
by Cristiana Luiza Radoi, Oana Mariana Cristea, Dan Dumitru Vulcanescu, Adela Voinescu, Tiberiu Liviu Dragomir, Laurentiu Vasile Sima, Sonia Tanasescu, Octavia Oana Harich, Andrei Theodor Balasoiu, Dominic Gabriel Iliescu and Ovidiu Zlatian
Life 2024, 14(5), 596; https://doi.org/10.3390/life14050596 (registering DOI) - 07 May 2024
Abstract
Background: Pregnancy-related infections with the human herpes simplex virus (HSV) strains HSV-1 and HSV-2 are particularly noteworthy. There are numerous reported examples of intrapartum transmission of herpes infection, notwithstanding the extreme rarity of intrauterine transfer from mother to fetus. The purpose of this [...] Read more.
Background: Pregnancy-related infections with the human herpes simplex virus (HSV) strains HSV-1 and HSV-2 are particularly noteworthy. There are numerous reported examples of intrapartum transmission of herpes infection, notwithstanding the extreme rarity of intrauterine transfer from mother to fetus. The purpose of this study was to evaluate the seroprevalence of HSV-1 and HSV-2 antibodies in pregnant women in the western region of Romania. Methods: Pregnant women who presented for routine pregnancy monitoring at Romania’s County Clinical Emergency Hospital in Craiova between 2013 and 2016 and 2019 and 2022 were included in the study. In order to find anti-HSV-1/2 IgG antibodies, we conducted serological testing on the patients and gathered demographic information from them. Results: HSV-1 seroprevalence was shown to have declined in rural areas and increased in urban areas, with values between 2013 and 2016 being 89.30% and those between 2019 and 2022 being 84.96%, respectively. Women over 35 who were pregnant had the highest seroprevalence. The seroprevalence of HSV-2 decreased from 16.16% in 2013–2016 to 12.43% in 2019–2022, and both rural and urban areas continued to experience this declining trend. Similarly, pregnant women over 35 years old had the highest frequency of HSV-1 infections. Conclusions: Establishing educational programs and other actions to reduce the transmission rate and ultimately the prevalence of the disease can be made easier with knowledge about the seroprevalence of HSV-1 and HSV-2 infections. Full article
(This article belongs to the Section Epidemiology)
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20 pages, 2252 KiB  
Article
DNA Methylation Analysis of Growth Differences between Upright and Inverted Cuttings of Populus yunnanensis
by Haiyang Guo, Tiansu Guo, Hailin Li, Shaojie Ma, Xiaolin Zhang, Chengzhong He and Dan Zong
Int. J. Mol. Sci. 2024, 25(10), 5096; https://doi.org/10.3390/ijms25105096 (registering DOI) - 07 May 2024
Abstract
DNA methylation is an important mechanism for epigenetic modifications that have been shown to be associated with responses to plant development. Previous studies found that inverted Populus yunnanensis cuttings were still viable and could develop into complete plants. However, the growth status of [...] Read more.
DNA methylation is an important mechanism for epigenetic modifications that have been shown to be associated with responses to plant development. Previous studies found that inverted Populus yunnanensis cuttings were still viable and could develop into complete plants. However, the growth status of inverted cuttings was weaker than that of upright cuttings, and the sprouting time of inverted cuttings was later than that of upright cuttings. There is currently no research on DNA methylation patterns in inverted cuttings of Populus yunnanensis. In this study, we detected genome-wide methylation patterns of stem tips of Populus yunnanensis at the early growth stage and the rapid growth stage by Oxford Nanopore Technologies (ONT) methylation sequencing. We found that the methylation levels of CpG, CHG, CHH, and 6mA were 41.34%, 33.79%, 17.27%, and 12.90%, respectively, in the genome of inverted poplar cuttings, while the methylation levels of the four methylation types were higher in the genome of upright poplar cuttings than in inverted cuttings, 41.90%, 34.57%, 18.09%, and 14.11%, suggesting important roles for DNA methylation in poplar cells. In all comparison groups, CpG-type methylation genes in the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway were annotated to pathways associated with carbon metabolism, ribosome biogenesis in eukaryotes, glycolysis/gluconeogenesis, pyruvate metabolism, and mRNA detection pathways, suggesting that different biological processes are activated in upright and inverted cuttings. The results show that methylation genes are commonly present in the poplar genome, but only a few of them are involved in the regulation of expression in the growth and development of inverted cuttings. From this, we screened the DET2 gene for significant differences in methylation levels in upright or inverted cuttings. The DET2 gene is a key gene in the Brassinolide (BRs) synthesis pathway, and BRs have an important influence on the growth and development process of plants. These results provide important clues for studying DNA methylation patterns in P. yunnanensis. Full article
(This article belongs to the Section Molecular Plant Sciences)
17 pages, 907 KiB  
Article
Mathematical Programming Formulations for the Berth Allocation Problems in Container Seaport Terminals
by Awad M. Aljuaid, Mayssa Koubâa, Mohamed Haykal Ammar, Karim Kammoun and Wafik Hachicha
Logistics 2024, 8(2), 50; https://doi.org/10.3390/logistics8020050 (registering DOI) - 07 May 2024
Abstract
Background: Improving the performance of marine terminals is one of the major concerns of both researchers and decision-makers in the maritime transportation sector. The problem of container storage planning and the berth allocation problem (BAP) are the two mainstays of optimizing port [...] Read more.
Background: Improving the performance of marine terminals is one of the major concerns of both researchers and decision-makers in the maritime transportation sector. The problem of container storage planning and the berth allocation problem (BAP) are the two mainstays of optimizing port operations. Methods: In this work, we address these two issues, proposing two mathematical models that operate sequentially and are applicable to both static and dynamic cases. The first developed model is a mixed-integer linear problem model aimed at minimizing vessel traffic time in the port. The second model developed is a multi-objective optimization model based on goal programming (GP) to minimize both container transfer time and the number of storage areas (minimizing container dispersion). Results: The robustness of the proposed models has been proven through a benchmark with tests using data from the literature and real port data, based on the IBM ILOG CPLEX 12.5 solver. Conclusions: The two developed mathematical models allowed the both minimization of the transfer time and the number of used storage areas, whatever the number of operations handling companies (OHCs) operating in the seaport and for both static and dynamic cases. We propose, as prospects for this work, the development of a heuristic model to deal with the major instances relating to the case of large ports. Full article
13 pages, 7582 KiB  
Article
First Results of Nb3Sn Coated Cavity by Vapor Diffusion Method at SARI
by Qixin Chen, Yue Zong, Zheng Wang, Shuai Xing, Jiani Wu, Pengcheng Dong, Miyimin Zhao, Xiaowei Wu, Jian Rong and Jinfang Chen
Coatings 2024, 14(5), 581; https://doi.org/10.3390/coatings14050581 (registering DOI) - 07 May 2024
Abstract
Nb3Sn is emerging as one of the focal points in superconducting radio frequency (SRF) research, owing to its excellent superconducting properties. These properties hold significant possibilities for cost reduction and the miniaturization of accelerators. In this paper, we report the recent [...] Read more.
Nb3Sn is emerging as one of the focal points in superconducting radio frequency (SRF) research, owing to its excellent superconducting properties. These properties hold significant possibilities for cost reduction and the miniaturization of accelerators. In this paper, we report the recent efforts of the Shanghai Advanced Research Institute (SARI) in fabricating high-performance Nb3Sn superconducting cavities using the vapor diffusion method. This includes the construction of a Nb3Sn coating system with dual evaporators and the test results of 1.3 GHz single-cell coated cavities. The coated samples were characterized, and the growth state of the Nb3Sn films was analyzed. The first coated superconducting cavity was tested at both 4.4 K and 2 K, with different cooldown rates passing through the Nb3Sn critical temperatures. The causes of Sn droplet spot defect formation on the surface of the first cavity were analyzed, and such defects were eliminated in the coating of the second cavity by controlling the evaporation rate. This study provides a reference for the preparation of high-performance Nb3Sn-coated cavities using the vapor diffusion method, including the setup of the coating system, the comprehension of the vapor diffusion process, and the test conditions. Full article
(This article belongs to the Section Surface Characterization, Deposition and Modification)
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14 pages, 1000 KiB  
Article
Direct Economic Short-Term Impact of Public Spending in Sporting Events: The Case of the Elite and Senior Badminton World Championships
by María Quirante, Jordi Seguí-Urbaneja, Juan Carlos Guevara-Pérez and David Cabello-Manrique
Tour. Hosp. 2024, 5(2), 381-394; https://doi.org/10.3390/tourhosp5020024 (registering DOI) - 07 May 2024
Abstract
Sporting events are drivers of urban life and have the potential to bring substantial short-term economic benefits to the host region by attracting visitor spending. This study has analyzed the impact generated by the 2021 Senior and Elite Badminton World Championships that took [...] Read more.
Sporting events are drivers of urban life and have the potential to bring substantial short-term economic benefits to the host region by attracting visitor spending. This study has analyzed the impact generated by the 2021 Senior and Elite Badminton World Championships that took place in Huelva, Spain. The objectives are (i) determine the economic impact and determining factors; and (ii) the impact on the development of badminton in the region. For this purpose, the study used the Cost-Benefit Analysis approach to estimate the cashflows through a survey applied to both events. The results reflect a direct positive impact on the region’s economy, although the results are not as satisfactory at the sporting level. The article contributes to the few mid-range event studies on a minority sport in a city with a highly developed tourism sector. Full article
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11 pages, 257 KiB  
Article
Pre-Operative Group and Save in Elective and Emergency Laparoscopic Cholecystectomy: Necessity, Cost-Effectiveness, and Own Experience
by Mohammed Hamid, Marie Kershaw, Resya Bhakthavalsalan, Rishika Shivamurthy, Sian Davies, Rishi Singhal, Rajwinder Nijjar, Tom Wiggins, Ricardo Camprodon and Zuhair Ahmed
J. Clin. Med. 2024, 13(10), 2749; https://doi.org/10.3390/jcm13102749 (registering DOI) - 07 May 2024
Abstract
Background: Laparoscopic cholecystectomy is associated with a high safety profile. This study seeks to quantify the incidence of blood transfusion in both the elective and emergency settings, examine related patient outcomes, and investigate selection criteria for pre-operative Group and Save (G&S) sampling. [...] Read more.
Background: Laparoscopic cholecystectomy is associated with a high safety profile. This study seeks to quantify the incidence of blood transfusion in both the elective and emergency settings, examine related patient outcomes, and investigate selection criteria for pre-operative Group and Save (G&S) sampling. Methods: A prospective multi-centre observational study was conducted to investigate patients undergoing either elective or emergency laparoscopic cholecystectomy in the UK between January 2020 and May 2021. Multivariate logistical regression models were used to identify patient factors associated with the risk of transfusion and explore outcomes linked to pre-operative G&S sampling. Results: This study comprised 959 patients, with 631 (65.8%) undergoing elective cholecystectomy and 328 (34.2%) undergoing emergency surgery. The median age was 48 years (range: 35–59), with 724 (75.5%) of the patients being female. Only five patients (0.5%) required blood transfusions, receiving an average of three units, with the first unit administered approximately six hours post-operatively. Among these cases, three patients (60%) had underlying haematological conditions. In adjusted models, male gender was significantly associated with the need for a blood transfusion (OR 11.31, p = 0.013), while the presence of a pre-operative Group and Save sample did not demonstrate any positive impact on patient outcomes. Conclusions: The incidence of blood transfusion following laparoscopic cholecystectomy is very low. Male gender and haematological conditions may present as independent risk factors. Pre-operative G&S sampling did not yield any positive impact on patient outcomes and could be safely excluded in both elective and emergency cases, although certain population subsets will warrant further consideration. Full article
(This article belongs to the Special Issue New Challenges in Laparoscopic, Robotic and Endoscopic Surgery)
14 pages, 1566 KiB  
Article
Integrated Communication, Sensing, and Computation Framework for 6G Networks
by Xu Chen, Zhiyong Feng, J. Andrew Zhang, Zhaohui Yang, Xin Yuan, Xinxin He and Ping Zhang
Sensors 2024, 24(10), 2968; https://doi.org/10.3390/s24102968 (registering DOI) - 07 May 2024
Abstract
In the sixth generation (6G) era, intelligent machine network (IMN) applications, such as intelligent transportation, require collaborative machines with communication, sensing, and computation (CSC) capabilities. This article proposes an integrated communication, sensing, and computation (ICSAC) framework for 6G to achieve the reciprocity among [...] Read more.
In the sixth generation (6G) era, intelligent machine network (IMN) applications, such as intelligent transportation, require collaborative machines with communication, sensing, and computation (CSC) capabilities. This article proposes an integrated communication, sensing, and computation (ICSAC) framework for 6G to achieve the reciprocity among CSC functions to enhance the reliability and latency of communication, accuracy and timeliness of sensing information acquisition, and privacy and security of computing to realize the IMN applications. Specifically, the sensing and communication functions can merge into unified platforms using the same transmit signals, and the acquired real-time sensing information can be exploited as prior information for intelligent algorithms to enhance the performance of communication networks. This is called the computing-empowered integrated sensing and communications (ISAC) reciprocity. Such reciprocity can further improve the performance of distributed computation with the assistance of networked sensing capability, which is named the sensing-empowered integrated communications and computation (ICAC) reciprocity. The above ISAC and ICAC reciprocities can enhance each other iteratively and finally lead to the ICSAC reciprocity. To achieve these reciprocities, we explore the potential enabling technologies for the ICSAC framework. Finally, we present the evaluation results of crucial enabling technologies to show the feasibility of the ICSAC framework. Full article
(This article belongs to the Special Issue Communication, Sensing and Localization in 6G Systems)
27 pages, 8479 KiB  
Article
Comparison of Sentiment Analysis Methods Used to Investigate the Quality of Teaching Aids Based on Virtual Simulators of Embedded Systems
by Andrzej Radecki and Tomasz Rybicki
Electronics 2024, 13(10), 1811; https://doi.org/10.3390/electronics13101811 (registering DOI) - 07 May 2024
Abstract
Virtual simulators of embedded systems and analyses of student surveys regarding their use at the early stage of the process of learning embedded systems, are presented in this article. The questionnaires were prepared in the Polish language, and the answers were automatically translated [...] Read more.
Virtual simulators of embedded systems and analyses of student surveys regarding their use at the early stage of the process of learning embedded systems, are presented in this article. The questionnaires were prepared in the Polish language, and the answers were automatically translated into English using two publicly available translators. The results of users’ experiences and feelings related to the use of virtual simulators are shown on the basis of detected sentiment using three chosen analysis methods: the Flair NLP library, the Pattern library, and the BERT NLP model. The results of the selected sentiment detection methods were compared and related to users reference answers, which gives information about the methods quality of the methods and their possible use in the automated review analysis process. This paper comprises detailed sentiment analysis results with a broader statistical approach for each question. Based on the students feedback and sentiment analysis, a new version of the TMSLAB v.2 virtual simulator was created. Full article
(This article belongs to the Special Issue New Advances in Affective Computing)
19 pages, 1601 KiB  
Article
Biomarkers of Immersion in Virtual Reality Based on Features Extracted from the EEG Signals: A Machine Learning Approach
by Hamed Tadayyoni, Michael S. Ramirez Campos, Alvaro Joffre Uribe Quevedo and Bernadette A. Murphy
Brain Sci. 2024, 14(5), 470; https://doi.org/10.3390/brainsci14050470 (registering DOI) - 07 May 2024
Abstract
Virtual reality (VR) enables the development of virtual training frameworks suitable for various domains, especially when real-world conditions may be hazardous or impossible to replicate because of unique additional resources (e.g., equipment, infrastructure, people, locations). Although VR technology has significantly advanced in recent [...] Read more.
Virtual reality (VR) enables the development of virtual training frameworks suitable for various domains, especially when real-world conditions may be hazardous or impossible to replicate because of unique additional resources (e.g., equipment, infrastructure, people, locations). Although VR technology has significantly advanced in recent years, methods for evaluating immersion (i.e., the extent to which the user is engaged with the sensory information from the virtual environment or is invested in the intended task) continue to rely on self-reported questionnaires, which are often administered after using the virtual scenario. Having an objective method to measure immersion is particularly important when using VR for training, education, and applications that promote the development, fine-tuning, or maintenance of skills. The level of immersion may impact performance and the translation of knowledge and skills to the real-world. This is particularly important in tasks where motor skills are combined with complex decision making, such as surgical procedures. Efforts to better measure immersion have included the use of physiological measurements including heart rate and skin response, but so far they do not offer robust metrics that provide the sensitivity to discriminate different states (idle, easy, and hard), which is critical when using VR for training to determine how successful the training is in engaging the user’s senses and challenging their cognitive capabilities. In this study, electroencephalography (EEG) data were collected from 14 participants who completed VR jigsaw puzzles with two different levels of task difficulty. Machine learning was able to accurately classify the EEG data collected during three different states, obtaining accuracy rates of 86% and 97% for differentiating easy versus hard difficulty states and baseline vs. VR states. Building on these results may enable the identification of robust biomarkers of immersion in VR, enabling real-time recognition of the level of immersion that can be used to design more effective and translative VR-based training. This method has the potential to adjust aspects of VR related to task difficulty to ensure that participants are immersed in VR. Full article
(This article belongs to the Special Issue Advances of AI in Neuroimaging)
15 pages, 1244 KiB  
Article
Ultrasound-Assisted Extraction of Bioactive Compounds from Broccoli By-Products
by Lorena Martínez-Zamora, Seyedehzeinab Hashemi, Marina Cano-Lamadrid, María Carmen Bueso, Encarna Aguayo, Mathieu Kessler and Francisco Artés-Hernández
Foods 2024, 13(10), 1441; https://doi.org/10.3390/foods13101441 (registering DOI) - 07 May 2024
Abstract
The objective of this work was to gain insight into the operating conditions that affect the efficiency of ultrasound-assisted extraction (UAE) parameters to achieve the best recovery of bioactive compounds from broccoli leaf and floret byproducts. Therefore, total phenolic content (TPC) and the [...] Read more.
The objective of this work was to gain insight into the operating conditions that affect the efficiency of ultrasound-assisted extraction (UAE) parameters to achieve the best recovery of bioactive compounds from broccoli leaf and floret byproducts. Therefore, total phenolic content (TPC) and the main sulfur bioactive compounds (sulforaphane (SFN) and glucosinolates (GLSs)) were assayed. Distilled water was used as solvent. For each byproduct type, solid/liquid ratio (1:25 and 2:25 g/mL), temperature (25, 40, and 55 °C), and extraction time (2.5, 5, 7.5, 10, 15, and 20 min) were the studied variables to optimize the UAE process by using a kinetic and a cubic regression model. TPC was 12.5-fold higher in broccoli leaves than in florets, while SFN was from 2.5- to 4.5-fold higher in florets regarding the leaf’s extracts obtained from the same plants, their precursors (GLS) being in similar amounts for both plant tissues. The most efficient extraction conditions were at 25 °C, ratio 2:25, and during 15 or 20 min according to the target phytochemical to extract. In conclusion, the type of plant tissue and used ratio significantly influenced the extraction of bioactive compounds, the most efficient UAE parameters being those with lower energy consumption. Full article
18 pages, 1433 KiB  
Article
Production of Polyphenolic Natural Products by Bract-Derived Tissue Cultures of Three Medicinal Tilia spp.: A Comparative Untargeted Metabolomics Study
by Zsolt Szűcs, Zoltán Cziáky, László Volánszki, Csaba Máthé, Gábor Vasas and Sándor Gonda
Plants 2024, 13(10), 1288; https://doi.org/10.3390/plants13101288 (registering DOI) - 07 May 2024
Abstract
Medicinal plant tissue cultures are potential sources of bioactive compounds. In this study, we report the chemical characterization of the callus cultures of three medicinal Tilia spp. (Tilia cordata, Tilia vulgaris and Tilia tomentosa), along with the comparison to bracts [...] Read more.
Medicinal plant tissue cultures are potential sources of bioactive compounds. In this study, we report the chemical characterization of the callus cultures of three medicinal Tilia spp. (Tilia cordata, Tilia vulgaris and Tilia tomentosa), along with the comparison to bracts and flowers of the same species. Our aim was to show that calli of Tilia spp. are good alternatives to the calli of T. americana for the production of polyphenols and are better sources of a subset of polyphenolic metabolites, compared to the original organs. Calli were initiated from young bracts and grown on woody plant medium containing 1 mg L−1 2,4-D and 0.1 mg L−1 BAP. For chemical characterization, a quality-controlled untargeted metabolomics approach and the quantification of several bioactive compounds was performed with the use of LC-ESI-MS/MS. While bracts and flowers contained flavonoid glycosides (astragalin, isoquercitrin) as major polyphenols, calli of all species contained catechins, coumarins (fraxin, esculin and scopoletin) and flavane aglyca. T. tomentosa calli contained 5397 µg g DW−1 catechin, 201 µg g DW−1 esculin, 218 µg g DW−1 taxifolin and 273 µg g DW−1 eriodictyol, while calli from other species contained lower amounts. T. cordata and T. tomentosa flowers were rich in isoquercitrin, containing 8134 and 6385 µg g DW−1, respectively. The currently tested species contained many of the bioactive metabolites described from T. americana. The production of catechin was shown to be comparable to the most efficient tissue cultures reported. Flowers and bracts contained flavonoid glycosides, including tiliroside, resembling bioactive fractions of T. americana. In addition, untargeted metabolomics has shown fingerprint-like differences among species, highlighting possible chemotaxonomic and quality control applications, especially for bracts. Full article
(This article belongs to the Special Issue Plant Tissue Culture and Secondary Metabolites)
13 pages, 1765 KiB  
Article
Diabetes Causes Significant Alterations in Pulmonary Glucose Transporter Expression
by Allison Campolo, Zahra Maria and Véronique A. Lacombe
Metabolites 2024, 14(5), 267; https://doi.org/10.3390/metabo14050267 (registering DOI) - 07 May 2024
Abstract
Diabetes has been identified as a significant and independent risk factor for the development or increased severity of respiratory infections. However, the role of glucose transport in the healthy and diseased lung has received little attention. Specifically, the protein expression of the predominant [...] Read more.
Diabetes has been identified as a significant and independent risk factor for the development or increased severity of respiratory infections. However, the role of glucose transport in the healthy and diseased lung has received little attention. Specifically, the protein expression of the predominant glucose transporter (GLUT) isoforms in the adult lung remains largely to be characterized in both healthy and diabetic states. Type 1 diabetes was induced via streptozotocin and rescued via subcutaneous semi-osmotic insulin pump for 8 weeks. The gene and/or protein expression of the most predominant GLUT isoforms from Classes I and III, including the major insulin-sensitive isoform (i.e., GLUT4) and novel isoforms (i.e., GLUT-8 and GLUT-12), was quantified in the lung of healthy and diabetic mice via qRT-PCR and/or Western blotting. Pulmonary cell surface GLUT protein was measured using a biotinylated photolabeling assay, as a means to evaluate GLUT trafficking. Diabetic mice demonstrated significant alterations of total pulmonary GLUT protein expression, which were isoform- and location-dependent. Long-term insulin treatment rescued the majority of GLUT protein expression alterations in the lung during diabetes, as well as GLUT-4 and -8 trafficking to the pulmonary cell surface. These alterations in glucose homeostasis during diabetes may contribute to an increased severity of pulmonary infection during diabetes and may point to novel metabolic therapeutic strategies for diabetic patients with concurrent respiratory infections. Full article
(This article belongs to the Section Cell Metabolism)
11 pages, 569 KiB  
Review
Obstructive Sleep Apnea in Pregnancy: A Comprehensive Review of Maternal and Fetal Implications
by Antonino Maniaci, Luigi La Via, Basilio Pecorino, Benito Chiofalo, Giuseppe Scibilia, Salvatore Lavalle and Paolo Scollo
Neurol. Int. 2024, 16(3), 522-532; https://doi.org/10.3390/neurolint16030039 (registering DOI) - 07 May 2024
Abstract
Obstructive sleep apnea (OSA) is a prevalent yet underdiagnosed condition in pregnancy, associated with various maternal and fetal complications. This review synthesizes the current evidence on the epidemiology, pathophysiology, and neurological consequences of OSA in pregnancy, along with the potential management strategies. Articles [...] Read more.
Obstructive sleep apnea (OSA) is a prevalent yet underdiagnosed condition in pregnancy, associated with various maternal and fetal complications. This review synthesizes the current evidence on the epidemiology, pathophysiology, and neurological consequences of OSA in pregnancy, along with the potential management strategies. Articles were sourced from the PubMed, EMBASE, and Cochrane databases until 2023. Our comprehensive review highlights that the incidence of OSA increases during pregnancy due to physiological changes such as weight gain and hormonal fluctuations. OSA in pregnancy is linked with gestational hypertension, pre-eclampsia, gestational diabetes, and potential adverse fetal outcomes such as intrauterine growth restriction and preterm birth. Continuous positive airway pressure (CPAP) therapy remains the most effective management strategy for pregnant women with OSA. However, adherence to CPAP therapy is often suboptimal. This comprehensive review underscores the importance of the early recognition, timely diagnosis, and effective management of OSA in pregnancy to improve both maternal and fetal outcomes. Future research should focus on enhancing screening strategies and improving adherence to CPAP therapy in this population. Full article
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21 pages, 1293 KiB  
Article
Ionization Detail Parameters for DNA Damage Evaluation in Charged Particle Radiotherapy: Simulation Study Based on Cell Survival Database
by Monika Mietelska, Marcin Pietrzak, Aleksandr Bancer, Antoni Ruciński, Zygmunt Szefliński and Beata Brzozowska
Int. J. Mol. Sci. 2024, 25(10), 5094; https://doi.org/10.3390/ijms25105094 (registering DOI) - 07 May 2024
Abstract
Details of excitation and ionization acts hide a description of the biological effects of charged particle traversal through living tissue. Nanodosimetry enables the introduction of novel quantities that characterize and quantify the particle track structure while also serving as a foundation for assessing [...] Read more.
Details of excitation and ionization acts hide a description of the biological effects of charged particle traversal through living tissue. Nanodosimetry enables the introduction of novel quantities that characterize and quantify the particle track structure while also serving as a foundation for assessing biological effects based on this quantification. This presents an opportunity to enhance the planning of charged particle radiotherapy by taking into account the ionization detail. This work uses Monte Carlo simulations with Geant4-DNA code for a wide variety of charged particles and their radiation qualities to analyze the distribution of ionization cluster sizes within nanometer-scale volumes, similar to DNA diameter. By correlating these results with biological parameters extracted from the PIDE database for the V79 cell line, a novel parameter R2 based on ionization details is proposed for the evaluation of radiation quality in terms of biological consequences, i.e., radiobiological cross section for inactivation. By incorporating the probability p of sub-lethal damage caused by a single ionization, we address limitations associated with the usually proposed nanodosimetric parameter Fk for characterizing the biological effects of radiation. We show that the new parameter R2 correlates well with radiobiological data and can be used to predict biological outcomes. Full article
(This article belongs to the Section Molecular Biology)
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11 pages, 1992 KiB  
Article
Rapid Dissemination of blaNDM-5 Gene among Carbapenem-Resistant Escherichia coli Isolates in a Yellow-Feather Broiler Farm via Multiple Plasmid Replicon
by Zhenbao Ma, Bo Wang, Dongping Zeng, Huanzhong Ding and Zhenling Zeng
Pathogens 2024, 13(5), 387; https://doi.org/10.3390/pathogens13050387 (registering DOI) - 07 May 2024
Abstract
Although carbapenems have not been approved for animal use, carbapenem-resistant Escherichia coli (CREC) strains are increasingly being detected in food-producing animals, posing a significant public health risk. However, the epidemiological characteristics of CREC isolates in yellow-feather broiler farms remain unclear. We comprehensively investigated [...] Read more.
Although carbapenems have not been approved for animal use, carbapenem-resistant Escherichia coli (CREC) strains are increasingly being detected in food-producing animals, posing a significant public health risk. However, the epidemiological characteristics of CREC isolates in yellow-feather broiler farms remain unclear. We comprehensively investigated the genetic features of carbapenem-resistance genes among E. coli isolates recovered from a yellow-feather broiler farm in Guangdong province, China. Among the 172 isolates, 88 (51.2%) were recovered from chicken feces (88.5%, 54/61), the farm environment (51.1%, 24/47), and specimens of dead chickens (15.6%, 41/64). All CREC isolates were positive for the blaNDM-5 gene and negative for other carbapenem-resistance genes. Among 40 randomly selected isolates subjected to whole-genome sequencing, 10 belonged to distinct sequence types (STs), with ST167 (n = 12) being the most prevalent across different sources, suggesting that the dissemination of blaNDM-5 was mainly due to horizontal and clonal transmission. Plasmid analysis indicated that IncX3, IncHI2, and IncR-X1-X3 hybrid plasmids were responsible for the rapid transmission of the blaNDM-5 gene, and the genetic surrounding of blaNDM-5 contained a common mobile element of the genetic fragment designated “IS5-△ISAba125-blaNDM-5-bleMBL-trpF-dsbC”. These findings demonstrate a critical role of multiple plasmid replicons in the dissemination of blaNDM-5 and carbapenem resistance. Full article
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18 pages, 3973 KiB  
Article
Self-Consistent Model for the Compositional Profiles in Vapor–Liquid–Solid III–V Nanowire Heterostructures Based on Group V Interchange
by Vladimir G. Dubrovskii
Nanomaterials 2024, 14(10), 821; https://doi.org/10.3390/nano14100821 (registering DOI) - 07 May 2024
Abstract
Due to the very efficient relaxation of elastic stress on strain-free sidewalls, III–V nanowires offer almost unlimited possibilities for bandgap engineering in nanowire heterostructures by using material combinations that are attainable in epilayers. However, axial nanowire heterostructures grown using the vapor–liquid–solid method often [...] Read more.
Due to the very efficient relaxation of elastic stress on strain-free sidewalls, III–V nanowires offer almost unlimited possibilities for bandgap engineering in nanowire heterostructures by using material combinations that are attainable in epilayers. However, axial nanowire heterostructures grown using the vapor–liquid–solid method often suffer from the reservoir effect in a catalyst droplet. Control over the interfacial abruptness in nanowire heterostructures based on the group V interchange is more difficult than for group-III-based materials, because the low concentrations of highly volatile group V atoms cannot be measured after or during growth. Here, we develop a self-consistent model for calculations of the coordinate-dependent compositional profiles in the solid and liquid phases during the vapor–liquid–solid growth of the axial nanowire heterostructure Ax0B1-x0C/Ax1B1-x1C with any stationary compositions x0 and x1. The only assumption of the model is that the growth rates of both binaries AC and BC are proportional to the concentrations of group V atoms A and B in a catalyst droplet, requiring high enough supersaturations in liquid phase. The model contains a minimum number of parameters and fits quite well the data on the interfacial abruptness across double heterostructures in GaP/GaAsxP1-x/GaP nanowires. It can be used for any axial III–V nanowire heterostructures obtained through the vapor–liquid–solid method. It forms a basis for further developments in modeling the complex growth process and suppression of the interfacial broadening caused by the reservoir effect. Full article
(This article belongs to the Section Nanoelectronics, Nanosensors and Devices)
20 pages, 5969 KiB  
Article
Ziziphus jujuba Miller Ethanol Extract Restores Disrupted Intestinal Barrier Function via Tight Junction Recovery and Reduces Inflammation
by Ye Jin Yang, Min Jung Kim, Ho Jeong Lee, Won-Yung Lee, Ju-Hye Yang, Hun Hwan Kim, Min Sup Shim, Ji Woong Heo, Jae Dong Son, Woo H. Kim, Gon Sup Kim, Hu-Jang Lee, Young-Woo Kim, Kwang Youn Kim and Kwang Il Park
Antioxidants 2024, 13(5), 575; https://doi.org/10.3390/antiox13050575 (registering DOI) - 07 May 2024
Abstract
Inflammatory bowel disease (IBD) is a chronic inflammatory condition caused by the disruption of the intestinal barrier. The intestinal barrier is maintained by tight junctions (TJs), which sustain intestinal homeostasis and prevent pathogens from entering the microbiome and mucosal tissues. Ziziphus jujuba Miller [...] Read more.
Inflammatory bowel disease (IBD) is a chronic inflammatory condition caused by the disruption of the intestinal barrier. The intestinal barrier is maintained by tight junctions (TJs), which sustain intestinal homeostasis and prevent pathogens from entering the microbiome and mucosal tissues. Ziziphus jujuba Miller (Z. jujuba) is a natural substance that has been used in traditional medicine as a therapy for a variety of diseases. However, in IBD, the efficacy of Z. jujuba is unknown. Therefore, we evaluated ZJB in Caco2 cells and a dextran sodium sulfate (DSS)-induced mouse model to demonstrate its efficacy in IBD. Z. jujuba extracts were prepared using 70% ethanol and were named ZJB. ZJB was found to be non-cytotoxic and to have excellent antioxidant effects. We confirmed its anti-inflammatory properties via the down-regulation of inflammatory factors, including inducible nitric oxide synthase (iNOS) and cyclooxygenase-2 (COX-2). To evaluate the effects of ZJB on intestinal barrier function and TJ improvement, the trans-epithelial electrical resistance (TEER) and fluorescein isothiocyanate-dextran 4 kDa (FITC-Dextran 4) permeability were assessed. The TEER value increased by 61.389% and permeability decreased by 27.348% in the 200 μg/mL ZJB group compared with the 50 ng/mL IL-6 group after 24 h. Additionally, ZJB alleviated body weight loss, reduced the disease activity index (DAI) score, and induced colon shortening in 5% DSS-induced mice; inflammatory cytokines, tumor necrosis factor (TNF)-α, and interleukin (IL)-6 were down-regulated in the serum. TJ proteins, such as Zonula occludens (ZO)-1 and occludin, were up-regulated by ZJB in an impaired Caco2 mouse model. Additionally, according to the liquid chromatography results, in tandem with mass spectrometry (LC-MS/MS) analysis, seven active ingredients were detected in ZJB. In conclusion, ZJB down-regulated inflammatory factors, protected intestinal barrier function, and increased TJ proteins. It is thus a safe, natural substance with the potential to be used as a therapeutic agent in IBD treatment. Full article
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18 pages, 2608 KiB  
Article
Perceptions of Tree Risks and Benefits in a Historically African American Neighborhood
by Alexis Martin, Jason Gordon, John Schelhas and Tawana Smith Mattox
Sustainability 2024, 16(10), 3913; https://doi.org/10.3390/su16103913 (registering DOI) - 07 May 2024
Abstract
An expansive body of research demonstrates the social and ecological benefits of urban forests, although urban tree canopy density tends to be lower than average in areas occupied by marginalized populations. Non-profit organizations and local governments have initiated tree-planting programs; however, some of [...] Read more.
An expansive body of research demonstrates the social and ecological benefits of urban forests, although urban tree canopy density tends to be lower than average in areas occupied by marginalized populations. Non-profit organizations and local governments have initiated tree-planting programs; however, some of these programs have encountered local resistance. This study took place in a historically African American neighborhood in the Southern USA with a low tree canopy where residents expressed disinterest in replanting trees following a tree hazard removal campaign led by a local non-profit organization. Employing focus groups and interviews, we explored residents’ environmental attitudes and risk perceptions by asking about the risks and benefits of neighborhood trees and barriers to the enjoyment of them. The material and emotional bonds residents have with the neighborhood informed their preferences about trees and green space. Trees were often viewed as hazards and financial risks, although they were an integral part of residents’ identities for themselves and their community. The findings suggest that neglecting to look at diverse perceptions will challenge a city’s ability to communicate about the urban forest and, therefore, sustainably address disparities in tree benefits and problems. Full article
(This article belongs to the Section Sustainable Forestry)

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